Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 5.0e-50 200.7 93 100.0
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 1.4e-36 156.0 94 77.7
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.9e-36 155.6 90 76.7
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.6e-35 152.5 94 72.3
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 2.7e-35 151.8 89 76.4
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 3.0e-34 148.3 86 77.9
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 6.6e-34 147.1 94 75.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 6.6e-34 147.1 94 75.5
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.6e-34 146.7 86 76.7
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 1.1e-33 146.4 80 80.0
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 2.5e-33 145.2 93 68.8
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.5e-33 145.2 93 71.0
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 2.8e-32 141.7 94 73.4
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.8e-32 141.7 95 67.4
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 8.1e-32 140.2 93 68.8
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.1e-31 139.8 80 75.0
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 1.4e-31 139.4 79 75.9
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 1.4e-31 139.4 84 71.4
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.4e-31 139.4 72 83.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.4e-31 139.4 72 83.3
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 4.0e-31 137.9 87 70.1
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 5.2e-31 137.5 77 79.2
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 5.2e-31 137.5 72 81.9
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 6.8e-31 137.1 78 75.6
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 8.9e-31 136.7 90 65.6
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 7.5e-30 133.7 82 76.8
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 4.9e-29 131.0 72 77.8
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 4.9e-29 131.0 66 83.3
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 6.4e-29 130.6 95 62.1
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 6.4e-29 130.6 75 76.0
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 8.3e-29 130.2 73 76.7
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 8.3e-29 130.2 90 66.7
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 8.3e-29 130.2 73 76.7
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.4e-28 129.4 88 68.2
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.9e-28 129.0 76 73.7
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.9e-28 129.0 92 65.2
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 3.2e-28 128.3 90 66.7
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 4.1e-28 127.9 89 64.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 5.4e-28 127.5 87 66.7
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 5.4e-28 127.5 86 65.1
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 5.4e-28 127.5 71 76.1
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 7.1e-28 127.1 87 66.7
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.2e-27 126.3 88 64.8
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.2e-27 126.3 93 62.4
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.6e-27 125.9 87 65.5
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 1.6e-27 125.9 86 67.4
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.1e-27 125.6 87 66.7
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 2.1e-27 125.6 77 70.1
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 2.7e-27 125.2 74 73.0
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 3.5e-27 124.8 87 65.5
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 3.5e-27 124.8 87 65.5
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 3.5e-27 124.8 91 65.9
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.5e-27 124.8 86 66.3
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 4.6e-27 124.4 87 64.4
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 6.0e-27 124.0 83 65.1
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 6.0e-27 124.0 87 65.5
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 7.8e-27 123.6 93 60.2
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 7.8e-27 123.6 83 65.1
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.0e-26 123.2 87 64.4
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 73.3
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.3e-26 122.9 88 65.9
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.3e-26 122.9 75 73.3
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 2.3e-26 122.1 84 61.9
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 2.3e-26 122.1 74 73.0
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 6.6e-26 120.6 75 72.0
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 6.6e-26 120.6 74 68.9
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 6.6e-26 120.6 74 68.9
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 8.6e-26 120.2 88 63.6
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 4.3e-25 117.9 68 72.1
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 4.3e-25 117.9 73 67.1
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 5.6e-25 117.5 78 62.8
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 5.6e-25 117.5 70 71.4
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.2e-24 116.3 77 67.5
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.2e-24 116.3 75 68.0
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 2.1e-24 115.5 87 64.4
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 3.6e-24 114.8 84 63.1
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 8.1e-24 113.6 84 61.9
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.4e-23 112.8 83 61.4
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.4e-23 112.8 84 63.1
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.4e-23 112.8 84 63.1
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 3.1e-23 111.7 84 60.7
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 3.1e-23 111.7 68 72.1
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 4.0e-23 111.3 126 48.4
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 2.0e-22 109.0 75 66.7
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.4e-22 108.2 87 59.8
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 3.4e-22 108.2 58 77.6
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 4.4e-22 107.8 66 75.8
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 4.4e-22 107.8 66 69.7
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 5.8e-22 107.5 103 51.5
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 7.6e-22 107.1 69 66.7
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 9.9e-22 106.7 54 81.5
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 9.9e-22 106.7 54 81.5
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 7.1e-20 100.5 116 44.8
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 2.1e-19 99.0 53 75.5
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 6.6e-18 94.0 66 68.2
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.6e-18 94.0 61 62.3
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 1.9e-17 92.4 60 58.3
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 5.6e-17 90.9 54 64.8
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 1.2e-16 89.7 65 53.8
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.7e-16 87.8 56 67.9
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.7e-16 87.8 56 67.9
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 8.1e-16 87.0 49 75.5
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.5e-14 82.8 43 79.1
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.3e-13 79.7 67 53.7
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.9e-13 78.6 42 78.6
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 8.7e-10 67.0 40 77.5
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.5e-09 66.2 42 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 7.3e-09 63.9 42 57.1
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 3.1e-07 58.5 28 85.7
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 6.9e-07 57.4 28 85.7
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 9.0e-07 57.0 58 37.9


User provided reference genes

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