Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.1e-134 483.4 256 100.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.9e-39 166.4 256 46.9
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 2.1e-37 160.2 249 47.8
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 2.7e-37 159.8 244 46.7
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 4.6e-37 159.1 252 46.4
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.8e-36 157.1 245 45.3
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.8e-34 149.8 257 44.4
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 8.1e-34 148.3 256 43.8
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 1.2e-32 144.4 240 43.3
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.4e-30 137.5 255 42.0
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.5e-30 135.6 253 41.1
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 9.3e-30 134.8 252 40.1
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.6e-29 134.0 254 43.3
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 7.9e-29 131.7 255 41.2
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 3.0e-28 129.8 238 44.1
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.0e-28 129.8 230 41.3
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.5e-27 127.5 252 38.9
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 1.9e-27 127.1 253 39.9
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.3e-27 126.3 251 39.8
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 5.6e-27 125.6 252 38.5
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 5.3e-25 119.0 232 42.7
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 1.3e-23 114.4 249 38.2
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 5.5e-22 109.0 247 35.2
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.2e-21 107.8 233 40.3
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 1.6e-21 107.5 243 35.4
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.7e-21 106.7 236 38.1
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 3.5e-21 106.3 243 37.0
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 4.6e-21 105.9 225 36.4
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.3e-20 104.4 263 36.1
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 3.0e-20 103.2 260 37.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 8.7e-20 101.7 243 33.7
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 2.5e-19 100.1 246 32.5
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 3.3e-19 99.8 244 32.0
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 3.3e-19 99.8 257 35.4
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 1.3e-18 97.8 240 33.8
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 3.7e-18 96.3 242 32.2
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.8e-17 94.0 222 36.5
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 3.1e-17 93.2 256 33.2
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 5.3e-17 92.4 214 38.8
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 6.9e-17 92.0 68 66.2
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.6e-16 90.1 83 61.4
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 2.6e-16 90.1 215 36.3
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 5.0e-15 85.9 253 32.0
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 5.5e-14 82.4 260 32.3
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 5.5e-14 82.4 241 30.7
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 9.4e-14 81.6 223 34.5
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.6e-13 80.9 244 28.3
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 2.1e-13 80.5 255 32.2
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 2.7e-13 80.1 241 32.4
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 4.6e-13 79.3 267 30.3
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.9e-13 78.6 268 29.9
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 1.0e-12 78.2 164 40.9
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 1.0e-12 78.2 51 68.6
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 1.4e-12 77.8 266 30.5
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 1.8e-12 77.4 240 30.8
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 6.7e-12 75.5 253 30.0
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 8.8e-12 75.1 243 33.7
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.5e-11 74.3 242 31.8
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 2.0e-11 73.9 242 32.2
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 2.5e-11 73.6 272 29.0
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 5.7e-11 72.4 266 29.7
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 5.7e-11 72.4 263 30.0
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.7e-10 70.9 267 30.0
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 2.2e-10 70.5 256 28.1
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 8.2e-10 68.6 75 48.0
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 2.4e-09 67.0 57 59.6
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.4e-09 67.0 143 36.4
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 4.1e-09 66.2 225 28.0
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 6.9e-09 65.5 216 30.1
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 1.2e-08 64.7 208 30.3
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.2e-08 64.7 225 27.6
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 2.6e-08 63.5 64 51.6
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 7.7e-08 62.0 261 28.4
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.2e-07 60.5 118 34.7
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 2.2e-07 60.5 223 29.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 2.9e-07 60.1 254 27.6
VMungo0647G1789 Vigna mungo HOM05D007827 ORTHO05D009749 8.5e-07 58.5 253 28.5
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.9e-06 57.4 252 26.6
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 7.2e-06 55.5 234 31.6
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 7.2e-06 55.5 218 31.7


User provided reference genes

Program Settings