Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 5.1e-287 990.3 485 100.0
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 2.2e-237 825.5 485 83.9
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 8.2e-237 823.5 488 83.2
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 3.1e-236 821.6 485 84.1
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 7.0e-236 820.5 485 83.3
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 7.7e-235 817.0 485 83.1
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 7.7e-235 817.0 488 82.8
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.1e-233 813.1 483 83.4
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.9e-233 812.4 485 80.8
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 3.2e-233 811.6 485 81.6
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 7.2e-233 810.4 485 81.4
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.0e-231 806.6 485 79.8
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 6.8e-231 803.9 486 81.3
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.5e-230 802.7 485 82.3
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 2.0e-230 802.4 485 81.9
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 2.0e-230 802.4 485 82.3
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 3.4e-230 801.6 486 82.7
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 3.4e-230 801.6 482 81.7
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 4.4e-230 801.2 485 82.3
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 5.7e-230 800.8 485 81.0
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-229 799.3 485 81.0
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-229 799.3 485 81.0
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.8e-229 798.5 483 81.4
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 2.8e-229 798.5 485 80.4
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 2.8e-229 798.5 485 80.8
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 6.3e-229 797.3 483 81.0
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 8.3e-229 797.0 485 79.6
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 8.3e-229 797.0 485 81.4
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.4e-228 795.4 485 81.9
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 3.1e-228 795.0 485 79.8
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 3.1e-228 795.0 484 80.8
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.1e-228 794.7 485 81.6
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 4.1e-228 794.7 485 79.8
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 4.1e-228 794.7 482 79.9
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 5.4e-228 794.3 485 79.4
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.7e-227 792.0 486 80.2
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.5e-227 791.6 482 80.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 3.5e-227 791.6 482 81.3
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.0e-226 790.0 420 89.5
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.2e-226 788.9 486 80.2
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.8e-226 788.1 485 81.0
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 3.8e-226 788.1 482 79.5
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 3.2e-225 785.0 488 79.3
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 5.5e-225 784.3 485 80.6
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 5.5e-225 784.3 482 79.3
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 7.2e-225 783.9 485 79.8
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.5e-225 783.5 485 78.8
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.2e-224 783.1 492 78.5
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.6e-224 782.7 486 80.0
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.6e-224 782.7 487 80.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 2.8e-224 781.9 488 78.7
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 3.6e-224 781.6 486 79.8
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 6.1e-224 780.8 486 80.0
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 8.0e-224 780.4 486 78.8
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.0e-223 780.0 485 80.2
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.0e-223 780.0 485 78.4
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.8e-223 779.2 485 78.6
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 2.3e-223 778.9 494 78.1
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.0e-223 778.5 485 78.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 4.0e-223 778.1 485 78.4
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.2e-222 776.5 494 77.7
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.5e-222 776.2 485 78.4
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.6e-222 775.4 485 78.6
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.4e-222 775.0 485 79.0
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 3.4e-222 775.0 454 84.1
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.3e-221 773.1 488 78.9
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.3e-221 773.1 486 79.0
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 2.8e-221 771.9 483 79.3
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 3.7e-221 771.5 489 78.1
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 3.7e-221 771.5 483 79.5
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.4e-220 768.8 483 77.8
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 3.1e-220 768.5 483 77.8
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 7.0e-220 767.3 490 78.0
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 7.8e-219 763.8 483 77.2
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.0e-218 763.5 516 74.0
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.3e-218 762.3 483 76.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 6.6e-218 760.8 485 78.6
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.9e-217 759.2 490 76.9
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.2e-216 756.5 486 76.5
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 2.3e-215 752.3 486 76.7
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 2.0e-214 749.2 487 76.4
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 7.5e-214 747.3 487 75.4
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.7e-213 746.1 490 76.1
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.7e-213 746.1 484 76.0
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.9e-213 744.6 485 75.9
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 8.3e-213 743.8 489 76.7
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 3.2e-212 741.9 485 77.7
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 7.0e-212 740.7 488 75.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.1e-209 733.4 488 75.0
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.1e-209 733.4 488 75.0
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 9.5e-209 730.3 392 87.5
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 4.7e-208 728.0 395 86.6
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 8.0e-208 727.2 485 74.6
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 6.8e-207 724.2 483 74.1
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 8.9e-207 723.8 488 74.6
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-206 723.4 485 74.6
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.2e-206 723.4 482 74.7
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 2.0e-206 722.6 389 86.9
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 1.6e-200 703.0 444 77.0
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 3.6e-200 701.8 449 77.5
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 8.6e-194 680.6 427 74.9
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.5e-193 679.9 434 74.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.4e-191 673.3 412 77.7
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 7.6e-190 667.5 398 79.9
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 2.2e-189 666.0 389 79.7
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 9.2e-188 660.6 483 69.4
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 8.7e-178 627.5 385 79.5
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 4.3e-177 625.2 486 67.5
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 3.6e-176 622.1 394 73.4
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.8e-176 621.7 436 72.5
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 4.0e-167 592.0 389 68.4
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 5.8e-166 588.2 394 67.5
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.2e-157 559.7 289 92.4
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 4.2e-156 555.4 286 92.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.2e-147 527.3 343 75.2
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.8e-135 486.9 362 67.1
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.3e-108 396.4 273 72.5
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.1e-103 379.4 237 76.8
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.9e-82 308.5 174 83.3
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.0e-62 242.7 196 61.7
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.9e-61 240.0 132 86.4
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 2.1e-59 234.2 130 83.1
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 4.8e-59 233.0 138 81.2
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 9.0e-50 202.2 140 75.0
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 4.9e-48 196.4 160 63.1
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 6.0e-38 162.9 94 84.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 4.2e-31 140.2 105 65.7
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.4e-13 82.0 59 67.8
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 4.4e-12 77.0 284 26.8
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.5e-09 67.4 285 25.6
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 2.9e-08 64.3 157 29.3
FAN08G0150 Fragaria x ananassa HOM05D000776 ORTHO05D001624 1.1e-07 62.4 149 28.2
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 7.2e-07 59.7 158 26.6
FAN18G4093 Fragaria x ananassa HOM05D000776 ORTHO05D001624 7.2e-07 59.7 149 27.5
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 9.4e-07 59.3 157 28.7


User provided reference genes

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