Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 7.9e-175 617.1 325 100.0
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.0e-126 455.7 321 73.2
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 4.8e-124 448.4 321 72.9
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.1e-123 447.2 320 73.8
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 7.7e-122 441.0 324 73.1
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.9e-121 439.1 321 72.0
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 7.2e-120 434.5 322 71.7
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.1e-119 433.0 323 71.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.7e-119 432.6 321 71.3
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.7e-119 431.8 322 71.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.1e-119 431.4 321 69.8
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.0e-118 428.7 323 70.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 5.2e-118 428.3 323 71.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 8.8e-118 427.6 323 71.2
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.0e-117 426.4 323 69.3
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.8e-116 422.5 322 71.1
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.7e-116 422.2 321 72.9
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.1e-115 419.1 322 69.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.1e-115 419.1 323 70.3
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.1e-115 418.7 326 71.2
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.6e-114 416.8 324 71.0
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.0e-114 416.4 323 69.3
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 5.9e-114 414.8 345 65.2
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.0e-113 414.1 324 69.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.7e-113 413.3 327 70.6
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.8e-113 412.1 324 70.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 8.5e-113 411.0 289 75.1
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 8.5e-113 411.0 328 69.8
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.2e-112 409.1 323 69.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.6e-111 406.8 328 69.2
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.7e-111 406.0 323 68.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.6e-111 405.6 323 68.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 3.6e-111 405.6 321 67.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 6.1e-111 404.8 326 69.3
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 6.1e-111 404.8 323 68.1
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.3e-110 402.9 330 68.8
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 2.3e-110 402.9 325 68.9
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.3e-110 402.9 325 67.4
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.0e-110 402.5 322 69.3
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.4e-109 399.1 329 68.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 4.4e-109 398.7 321 68.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.7e-109 398.3 326 68.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.8e-108 396.0 325 67.4
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.8e-107 393.3 314 69.4
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.1e-107 392.5 317 70.7
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 5.4e-107 391.7 327 66.7
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 9.2e-107 391.0 332 66.9
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.6e-106 390.2 330 66.4
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.5e-106 388.7 276 75.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 7.7e-106 387.9 299 70.2
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.3e-105 387.1 330 66.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 3.8e-105 385.6 319 67.1
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 5.0e-105 385.2 319 66.5
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 6.6e-105 384.8 335 65.1
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.6e-105 384.8 305 69.5
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.5e-104 383.6 327 65.7
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.5e-104 383.6 352 62.5
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.3e-104 382.5 259 78.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.3e-104 382.5 327 65.1
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.3e-104 382.1 248 80.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.6e-104 381.7 301 70.4
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 7.3e-104 381.3 333 65.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 7.3e-104 381.3 327 65.1
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.2e-103 380.6 320 65.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.2e-103 380.6 289 72.7
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.2e-103 380.6 331 65.9
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.6e-103 380.2 319 66.8
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 4.7e-103 378.6 320 65.9
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.8e-102 376.7 286 72.0
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.8e-102 376.7 258 76.4
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.4e-101 372.5 291 69.4
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 5.7e-101 371.7 288 69.4
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 7.5e-101 371.3 351 61.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.7e-100 370.2 265 74.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.2e-100 369.8 249 77.9
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.6e-98 363.6 304 66.4
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.6e-98 363.6 264 74.6
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 3.5e-98 362.5 320 61.2
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 7.8e-98 361.3 310 65.5
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 7.8e-98 361.3 235 81.7
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 7.8e-98 361.3 327 61.8
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.7e-97 360.1 318 62.9
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.7e-97 360.1 290 66.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.5e-96 357.1 235 77.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 3.3e-96 355.9 283 69.3
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.8e-95 352.8 267 67.8
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.8e-94 350.1 323 59.4
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.2e-93 347.4 347 59.9
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.0e-93 346.7 327 60.9
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.9e-92 342.8 249 72.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.4e-91 339.7 221 78.3
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.2e-85 320.9 236 70.8
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.9e-84 315.5 329 57.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.6e-82 310.5 256 68.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 8.1e-79 298.1 213 75.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.0e-77 293.5 226 69.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.9e-76 289.7 229 70.7
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 6.4e-76 288.5 215 65.6
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.5e-72 276.6 278 52.9
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 7.3e-72 275.0 230 65.7
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 5.8e-69 265.4 252 53.6
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 2.1e-66 256.9 280 49.3
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.5e-66 256.1 261 57.9
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.9e-65 252.7 269 49.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.8e-63 245.7 251 52.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.9e-62 241.9 253 51.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.2e-61 241.1 249 54.6
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 6.4e-60 235.3 286 46.5
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 6.0e-50 202.2 257 44.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.8e-47 193.4 128 77.3
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.1e-43 181.4 246 43.9
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 4.2e-43 179.5 125 74.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.5e-43 179.1 164 64.6
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 3.7e-39 166.4 246 37.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 9.1e-30 135.2 314 37.6
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.4e-25 121.3 244 31.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 8.5e-20 102.1 235 31.9
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 2.9e-12 77.0 83 56.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 3.7e-07 60.1 31 93.5
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 1.1e-06 58.5 145 35.9


User provided reference genes

Program Settings