Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g07650 Coffea canephora HOM05D006752 ORTHO05D008597 1.4e-87 326.2 164 100.0
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 3.6e-51 205.3 122 88.5
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 4.6e-38 161.8 120 68.3
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 6.0e-38 161.4 121 68.6
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 1.3e-37 160.2 120 67.5
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 3.0e-37 159.1 120 66.7
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 8.6e-37 157.5 120 69.2
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 4.3e-36 155.2 120 67.5
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 7.3e-36 154.5 121 66.1
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 2.1e-35 152.9 121 66.9
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 4.7e-35 151.8 121 66.1
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 1.1e-34 150.6 125 62.4
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 1.8e-34 149.8 120 63.3
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 4.0e-34 148.7 123 62.6
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 8.9e-34 147.5 120 63.3
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 1.2e-33 147.1 120 62.5
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 1.5e-33 146.7 121 63.6
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 2.6e-33 146.0 123 61.8
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 2.6e-33 146.0 121 61.2
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 4.4e-33 145.2 120 64.2
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 4.4e-33 145.2 120 64.2
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 4.4e-33 145.2 120 60.8
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 5.8e-33 144.8 120 63.3
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 5.8e-33 144.8 120 63.3
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 1.3e-32 143.7 120 60.8
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 1.3e-32 143.7 121 60.3
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 1.3e-32 143.7 120 57.5
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 1.7e-32 143.3 121 64.5
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 2.9e-32 142.5 122 61.5
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 2.9e-32 142.5 125 60.0
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 6.4e-32 141.4 122 62.3
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 6.4e-32 141.4 122 60.7
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 6.4e-32 141.4 118 61.9
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 8.3e-32 141.0 121 59.5
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 8.3e-32 141.0 121 59.5
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 1.4e-31 140.2 120 60.0
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 2.4e-31 139.4 120 57.5
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 2.4e-31 139.4 121 57.9
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 2.4e-31 139.4 145 51.7
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 4.1e-31 138.7 120 60.8
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 5.4e-31 138.3 120 60.8
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 7.0e-31 137.9 122 58.2
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 2.1e-30 136.3 120 60.8
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 2.7e-30 136.0 124 57.3
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 3.5e-30 135.6 122 58.2
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 3.5e-30 135.6 120 60.0
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 3.5e-30 135.6 120 58.3
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 4.6e-30 135.2 120 56.7
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 6.0e-30 134.8 133 54.1
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 1.3e-29 133.7 120 60.0
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 1.7e-29 133.3 137 53.3
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 1.7e-29 133.3 128 53.9
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 1.7e-29 133.3 117 60.7
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 1.7e-29 133.3 157 47.8
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 1.7e-29 133.3 120 58.3
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 1.7e-29 133.3 117 58.1
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 1.7e-29 133.3 121 57.0
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 1.7e-29 133.3 120 59.2
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 2.3e-29 132.9 142 51.4
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 3.0e-29 132.5 121 57.9
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 6.6e-29 131.3 122 55.7
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 6.6e-29 131.3 120 57.5
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 6.6e-29 131.3 120 57.5
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 6.6e-29 131.3 120 55.8
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 6.6e-29 131.3 119 58.0
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 8.6e-29 131.0 117 57.3
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 8.6e-29 131.0 120 53.3
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 1.1e-28 130.6 122 55.7
Sc08g0007030 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.1e-28 130.6 121 54.5
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.5e-28 130.2 121 57.0
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 1.5e-28 130.2 117 58.1
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 1.9e-28 129.8 120 56.7
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 1.9e-28 129.8 120 56.7
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 1.9e-28 129.8 120 56.7
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 3.3e-28 129.0 118 56.8
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 3.3e-28 129.0 120 56.7
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 4.3e-28 128.6 120 52.5
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 5.6e-28 128.3 117 55.6
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 5.6e-28 128.3 120 55.8
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 5.6e-28 128.3 120 60.0
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 9.5e-28 127.5 122 50.8
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 8.9e-26 120.9 119 52.9
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 1.5e-25 120.2 125 52.8
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 7.5e-25 117.9 119 55.5
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 7.5e-25 117.9 116 53.4
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 9.9e-25 117.5 122 49.2
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 2.9e-24 115.9 120 50.8
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 4.9e-24 115.2 122 49.2
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 1.2e-22 110.5 110 50.0
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 2.3e-21 106.3 119 49.6
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 3.0e-21 105.9 170 37.6
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 6.6e-21 104.8 112 49.1
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 6.6e-21 104.8 110 50.9
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 5.6e-20 101.7 114 48.2
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 7.3e-20 101.3 121 48.8
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 9.5e-20 100.9 124 46.8
MD00G1026200 Malus domestica HOM05D006752 ORTHO05D008597 2.8e-19 99.4 112 51.8
MD02G1041600 Malus domestica HOM05D006752 ORTHO05D008597 2.4e-18 96.3 88 55.7
MD00G1027300 Malus domestica HOM05D006752 ORTHO05D008597 2.6e-17 92.8 85 57.6
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 2.6e-17 92.8 120 41.7
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 1.0e-13 80.9 142 39.4
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 1.0e-13 80.9 142 39.4
CSS0032277 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 4.3e-12 75.5 48 72.9
CBR_g41660 Chara braunii HOM05D001740 ORTHO05D001468 4.3e-12 75.5 124 31.5
MD02G1038900 Malus domestica HOM05D006752 ORTHO05D008597 1.8e-10 70.1 42 78.6
MD02G1041500 Malus domestica HOM05D006752 ORTHO05D008597 9.0e-10 67.8 65 52.3
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 1.2e-09 67.4 116 34.5
MCO09G826 Micromonas commoda HOM05D006752 ORTHO05D008597 1.2e-09 67.4 107 41.1
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 3.8e-08 62.4 48 58.3
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 4.6e-06 55.5 48 62.5


User provided reference genes

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