Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 0.0e+00 1120.9 541 100.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.2e-241 839.7 486 79.6
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 7.8e-236 820.5 490 76.7
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.9e-235 818.1 493 77.1
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.0e-235 817.8 500 75.2
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.0e-235 817.8 500 75.2
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 7.3e-234 813.9 482 77.4
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.2e-231 806.6 486 77.4
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 3.4e-231 805.1 484 76.9
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.3e-230 803.1 487 77.2
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 2.9e-230 802.0 486 76.5
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.9e-229 799.3 524 72.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 9.2e-229 797.0 485 75.5
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.7e-228 795.4 489 74.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.0e-227 793.5 491 76.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.7e-227 792.7 490 75.5
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 5.1e-227 791.2 486 76.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.1e-226 790.0 483 74.5
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.9e-226 789.3 511 73.6
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.5e-226 788.9 480 75.8
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 2.5e-226 788.9 535 69.3
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 5.6e-226 787.7 490 75.3
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 9.5e-226 786.9 489 74.6
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 2.8e-225 785.4 472 78.0
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 1.1e-224 783.5 487 75.4
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.4e-224 783.1 495 74.1
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.4e-224 783.1 521 69.9
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 2.3e-224 782.3 484 75.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.0e-223 779.2 490 74.3
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.6e-223 778.9 479 73.9
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 3.4e-223 778.5 490 74.1
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 5.8e-223 777.7 492 72.2
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 9.9e-223 776.9 489 74.4
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.3e-222 776.5 490 72.7
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 3.8e-222 775.0 489 73.6
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 3.2e-221 771.9 491 73.7
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 2.7e-220 768.8 485 72.4
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 3.9e-219 765.0 491 72.7
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 3.9e-219 765.0 479 73.3
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 6.6e-219 764.2 491 70.9
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.3e-218 761.9 490 71.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 9.6e-218 760.4 487 72.7
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-217 760.0 486 73.0
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.2e-217 760.0 460 76.1
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 3.6e-217 758.4 487 72.7
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 4.7e-217 758.1 508 69.9
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 4.7e-217 758.1 481 71.5
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.4e-216 756.5 490 71.4
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 4.0e-216 755.0 488 71.5
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 5.2e-216 754.6 485 70.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 6.9e-216 754.2 482 71.4
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.2e-215 753.4 488 72.3
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.4e-215 751.5 482 72.2
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 4.4e-215 751.5 482 71.2
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.6e-215 750.7 482 72.2
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 9.9e-215 750.4 488 71.1
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 2.2e-214 749.2 519 67.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 4.9e-214 748.0 455 75.8
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.1e-213 746.9 483 71.2
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 1.1e-213 746.9 488 69.9
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.4e-213 746.5 488 69.7
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.6e-212 743.0 484 70.2
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.0e-211 740.3 482 70.3
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.7e-211 739.6 492 69.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 2.3e-211 739.2 527 65.7
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.1e-210 736.9 490 70.4
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-210 736.5 490 70.4
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 9.6e-210 733.8 487 68.0
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 1.3e-209 733.4 492 68.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.1e-208 730.3 480 71.0
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.4e-208 729.9 492 67.5
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.0e-208 728.4 477 71.7
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.5e-207 726.5 477 69.4
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 9.9e-207 723.8 448 75.2
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.7e-204 715.7 483 67.9
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 8.7e-203 710.7 477 69.0
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.3e-202 708.8 480 68.8
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 4.8e-201 704.9 518 64.5
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.4e-200 702.6 487 66.7
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.3e-200 701.4 472 68.4
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 2.6e-199 699.1 481 68.0
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.8e-199 698.0 481 66.9
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 9.9e-199 697.2 460 70.7
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 4.9e-198 694.9 493 65.7
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 9.3e-197 690.6 516 63.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 9.3e-197 690.6 516 63.6
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.6e-196 689.9 516 63.6
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 6.0e-196 688.0 482 66.4
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.3e-195 686.0 508 64.2
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 5.6e-194 681.4 515 62.7
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.8e-192 676.4 477 68.6
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 9.0e-192 674.1 504 63.3
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 7.6e-191 671.0 528 61.6
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.8e-179 633.3 481 62.8
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 4.8e-177 625.2 527 58.6
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 2.5e-165 586.3 481 55.9
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 3.0e-155 552.7 386 67.9
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 8.2e-153 544.7 337 72.4
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 4.2e-149 532.3 369 68.0
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 5.2e-147 525.4 339 72.3
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.1e-136 489.6 332 66.9
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.3e-118 430.3 497 48.3
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.3e-115 420.2 293 66.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-114 417.9 284 66.9
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 2.2e-97 360.5 228 68.9
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.7e-89 334.3 214 68.2
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-74 283.9 178 75.3
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 4.9e-73 279.6 183 68.9
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 4.2e-64 250.0 149 78.5
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 6.9e-59 232.6 148 67.6
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 6.8e-22 109.8 104 55.8
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 7.5e-13 79.7 79 50.6
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.7e-12 78.6 78 52.6
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.7e-12 77.4 51 64.7
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 8.0e-07 59.7 77 46.8


User provided reference genes

Program Settings