Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g06710 Coffea canephora HOM05D011191 ORTHO05D010786 5.4e-105 384.4 203 100.0
Oeu064523.1 Olea europaea HOM05D011191 ORTHO05D010786 1.2e-16 90.9 138 42.0
MSTRG.11791 Avicennia marina HOM05D011191 ORTHO05D010786 3.6e-16 89.4 94 52.1
Migut.A00390 Erythranthe guttata HOM05D011191 ORTHO05D010786 4.6e-16 89.0 88 56.8
Nitab4.5_0012106g0010 Nicotiana tabacum HOM05D011191 ORTHO05D010786 6.1e-16 88.6 92 51.1
Peaxi162Scf01419g00119 Petunia axillaris HOM05D011191 ORTHO05D010786 6.1e-16 88.6 124 44.4
SGA_v2.0_scaffold27G11628 Striga asiatica HOM05D011191 ORTHO05D010786 7.9e-16 88.2 159 37.7
Nitab4.5_0000406g0150 Nicotiana tabacum HOM05D011191 ORTHO05D010786 2.3e-15 86.7 92 50.0
Sopen08g022570 Solanum pennellii HOM05D011191 ORTHO05D010786 1.1e-14 84.3 89 51.7
SalBow4G0292 Salvia bowleyana HOM05D011191 ORTHO05D010786 2.5e-14 83.2 123 44.7
RcHm_v2.0_Chr5g0018721 Rosa chinensis HOM05D014033 ORTHO05D010786 3.3e-14 82.8 97 50.5
FvH4_3g11660 Fragaria vesca HOM05D014033 ORTHO05D010786 7.4e-14 81.6 115 41.7
FAN21G1527 Fragaria x ananassa HOM05D014033 ORTHO05D010786 2.2e-13 80.1 115 41.7
PGSC0003DMG400014768 Solanum tuberosum HOM05D011191 ORTHO05D010786 2.8e-13 79.7 89 50.6
FAN16G2119 Fragaria x ananassa HOM05D014033 ORTHO05D010786 3.7e-13 79.3 115 40.9
Nitab4.5_0002341g0020 Nicotiana tabacum HOM05D002702 ORTHO05D003416 4.1e-12 75.9 120 42.5
Solyc08g068840.3 Solanum lycopersicum HOM05D011191 ORTHO05D010786 5.3e-12 75.5 88 48.9
Nitab4.5_0000563g0080 Nicotiana tabacum HOM05D002702 ORTHO05D003416 6.9e-12 75.1 120 42.5
CAN.G273.25 Capsicum annuum HOM05D011191 ORTHO05D010786 9.1e-12 74.7 156 34.0
Hund20999 Selenicereus undatus HOM05D022334 ORTHO05D019466 5.9e-11 72.0 100 46.0
Thecc.06G134400 Theobroma cacao HOM05D021816 ORTHO05D010786 1.3e-10 70.9 104 46.2
Psat5g080560 Pisum sativum HOM05D002702 ORTHO05D003416 1.1e-09 67.8 102 42.2
Potri.001G082800 Populus trichocarpa HOM05D011191 ORTHO05D010786 2.5e-09 66.6 110 40.9
Dinv25037 Davidia involucrata HOM05D002702 ORTHO05D003416 9.4e-09 64.7 162 35.2
EL10Ac3g05292 Beta vulgaris HOM05D022334 ORTHO05D019466 1.2e-08 64.3 100 46.0
Gohir.A06G141400 Gossypium hirsutum HOM05D021816 ORTHO05D010786 7.9e-08 61.6 91 42.9
COL.COLO4_30908 Corchorus olitorius HOM05D021816 ORTHO05D010786 1.4e-07 60.8 114 36.0
AUR62019394 Chenopodium quinoa HOM05D022334 ORTHO05D019466 1.8e-07 60.5 132 37.1
Aa31LG6G2140 Aethionema arabicum HOM05D010419 ORTHO05D012558 5.1e-07 58.9 94 43.6
GSVIVG01029946001 Vitis vinifera HOM05D002702 ORTHO05D003416 6.7e-07 58.5 151 31.8
PGR031G3358 Punica granatum HOM05D002702 ORTHO05D003416 1.1e-06 57.8 202 31.2
CAN.G756.30 Capsicum annuum HOM05D002702 ORTHO05D003416 2.0e-06 57.0 200 29.0
Actinidia07964 Actinidia chinensis HOM05D002702 ORTHO05D003416 2.6e-06 56.6 145 33.8
PSO210G0347 Papaver somniferum HOM05D002702 ORTHO05D003416 2.6e-06 56.6 184 31.0
Dinv17311 Davidia involucrata HOM05D002702 ORTHO05D003416 3.3e-06 56.2 133 33.1
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 4.4e-06 55.8 134 32.1
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 5.7e-06 55.5 217 26.7
Gohir.A13G160900 Gossypium hirsutum HOM05D002702 ORTHO05D003416 7.4e-06 55.1 136 33.1
Gohir.D13G166200 Gossypium hirsutum HOM05D002702 ORTHO05D003416 7.4e-06 55.1 136 33.1
Gorai.013G196300 Gossypium raimondii HOM05D002702 ORTHO05D003416 7.4e-06 55.1 136 33.1
Potri.001G246100 Populus trichocarpa HOM05D002702 ORTHO05D003416 7.4e-06 55.1 171 31.0
Lalb_Chr02g0157421 Lupinus albus HOM05D002702 ORTHO05D003416 9.7e-06 54.7 99 41.4


User provided reference genes

Program Settings