Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 7.0e-162 573.9 298 100.0
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-130 469.5 295 85.4
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 3.0e-32 143.3 248 31.5
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 4.1e-29 132.9 248 30.6
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 8.6e-27 125.2 192 32.8
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-26 122.5 195 35.4
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-25 120.2 150 39.3
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 8.0e-25 118.6 274 28.5
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 7.5e-23 112.1 169 33.7
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 1.3e-22 111.3 169 32.0
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 8.3e-22 108.6 196 31.6
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-21 105.9 239 30.1
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-20 104.4 155 31.0
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-20 103.6 129 36.4
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-20 103.2 156 31.4
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-20 102.4 242 28.5
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 6.6e-19 99.0 226 28.8
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 6.6e-19 99.0 227 30.8
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 6.6e-19 99.0 247 29.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-18 97.8 248 26.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-18 97.4 273 23.8
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 2.5e-18 97.1 247 28.3
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 3.3e-18 96.7 247 28.3
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-18 96.3 244 30.7
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-18 95.9 255 27.8
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-18 95.9 273 23.8
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-18 95.9 273 23.8
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-18 95.9 270 28.5
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-18 95.1 273 24.2
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-16 90.5 226 28.3
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-16 89.7 175 28.0
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 6.8e-16 89.0 88 46.6
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 8.9e-16 88.6 217 29.5
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-15 87.4 214 29.4
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.4e-15 86.3 103 37.9
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 4.4e-15 86.3 253 24.5
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-15 85.5 213 29.6
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-15 85.5 246 26.4
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-14 84.7 247 26.7
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-14 84.3 232 28.4
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-14 83.6 237 27.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-13 79.3 138 35.5
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-13 79.3 86 34.9
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-12 76.3 136 31.6
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-11 73.6 120 30.0
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-10 71.6 73 49.3
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-10 71.2 89 31.5
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 7.3e-10 68.9 244 22.5
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-08 64.3 89 36.0
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-08 63.5 82 35.4
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-08 62.4 138 34.1
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-07 61.2 121 28.9
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-06 56.2 81 30.9


User provided reference genes

Program Settings