Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g06350 Coffea canephora HOM05D001383 ORTHO05D000309 7.4e-52 206.8 98 100.0
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 1.8e-10 69.3 71 50.7
SGA_v2.0_scaffold79G25662 Striga asiatica HOM05D001383 ORTHO05D000309 9.1e-10 67.0 88 43.2
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-09 66.2 90 41.1
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 4.5e-09 64.7 93 41.9
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-09 63.9 83 43.4
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-09 63.9 83 43.4
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-08 63.5 63 50.8
Nitab4.5_0005741g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-08 62.4 86 40.7
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-08 62.4 86 40.7
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-08 62.4 70 45.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.9e-08 62.0 87 41.4
SGA_v2.0_scaffold185G40087 Striga asiatica HOM05D001383 ORTHO05D000309 2.9e-08 62.0 90 42.2
DCAR_026902 Daucus carota HOM05D001383 ORTHO05D000309 3.8e-08 61.6 85 37.6
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 3.8e-08 61.6 63 49.2
SGA_v2.0_scaffold179G39548 Striga asiatica HOM05D001383 ORTHO05D000309 3.8e-08 61.6 70 45.7
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.0e-08 61.2 76 42.1
Oeu042598.1 Olea europaea HOM05D001383 ORTHO05D000309 5.0e-08 61.2 66 47.0
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 5.0e-08 61.2 97 40.2
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.0e-08 61.2 86 39.5
SGA_v2.0_scaffold13G06411 Striga asiatica HOM05D001383 ORTHO05D000309 6.5e-08 60.8 84 38.1
SGA_v2.0_scaffold91G28014 Striga asiatica HOM05D041436 ORTHO05D000309 8.5e-08 60.5 70 42.9
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-07 60.1 76 40.8
SGA_v2.0_scaffold12G06232 Striga asiatica HOM05D001383 ORTHO05D000309 1.5e-07 59.7 86 37.2
SGA_v2.0_scaffold23G10087 Striga asiatica HOM05D001383 ORTHO05D000309 1.5e-07 59.7 87 39.1
SGA_v2.0_scaffold46G17446 Striga asiatica HOM05D001383 ORTHO05D000309 1.5e-07 59.7 86 37.2
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.5e-07 58.9 86 37.2
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-07 58.5 53 47.2
Lsat_1_v5_gn_3_4400 Lactuca sativa HOM05D001383 ORTHO05D000309 3.2e-07 58.5 86 34.9
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.2e-07 58.2 86 37.2
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.5e-07 57.8 87 36.8
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 5.5e-07 57.8 64 45.3
SGA_v2.0_scaffold10G05287 Striga asiatica HOM05D001383 ORTHO05D000309 5.5e-07 57.8 84 39.3
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 9.4e-07 57.0 91 36.3
CANSAT56G3744 Cannabis sativa HOM05D001383 ORTHO05D000309 1.2e-06 56.6 64 40.6
CANSAT80G1681 Cannabis sativa HOM05D001383 ORTHO05D000309 1.2e-06 56.6 64 40.6
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 56.6 76 38.2
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 56.6 65 44.6
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 56.6 65 44.6
SGA_v2.0_scaffold57G20130 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 56.6 85 34.1
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-06 56.2 89 37.1
Hma1.2p1_0787F.1_g217983 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.2 89 36.0
Hma1.2p1_0896F.1_g233840 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 56.2 83 41.0
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 81 38.3
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 87 39.1
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-06 55.5 89 37.1
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.7e-06 55.5 75 38.7
HanXRQChr14g0429441 Helianthus annuus HOM05D001383 ORTHO05D000309 2.7e-06 55.5 89 37.1
Oeu031331.1 Olea europaea HOM05D001383 ORTHO05D000309 2.7e-06 55.5 66 42.4
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 2.7e-06 55.5 79 41.8
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 2.7e-06 55.5 53 49.1
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.7e-06 55.5 78 38.5
vmacro21961 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.7e-06 55.5 87 37.9
ECA246G1994 Erigeron canadensis HOM05D001383 ORTHO05D000309 3.6e-06 55.1 85 36.5
Migut.O00432 Erythranthe guttata HOM05D001383 ORTHO05D000309 4.7e-06 54.7 86 40.7
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.7e-06 54.7 50 50.0
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.7e-06 54.7 79 38.0
Oeu001038.1 Olea europaea HOM05D001383 ORTHO05D000309 4.7e-06 54.7 66 43.9
SGA_v2.0_scaffold257G45698 Striga asiatica HOM05D001383 ORTHO05D000309 4.7e-06 54.7 64 43.8
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 6.1e-06 54.3 64 40.6
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 8.0e-06 53.9 85 32.9
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 8.0e-06 53.9 89 36.0
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 8.0e-06 53.9 64 40.6


User provided reference genes

Program Settings