Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 9.5e-171 603.6 344 100.0
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.1e-161 573.5 344 95.6
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.1e-110 404.1 335 71.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.4e-110 403.7 322 74.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.9e-110 403.3 327 70.9
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.4e-107 391.3 323 66.9
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 9.7e-107 391.0 321 71.7
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.7e-106 390.2 325 69.8
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 2.4e-105 386.3 320 70.6
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.7e-103 380.2 327 67.0
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 3.8e-103 379.0 184 97.3
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.5e-103 377.9 325 68.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 3.2e-102 375.9 320 69.7
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 2.1e-101 373.2 327 68.8
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 6.1e-101 371.7 319 70.2
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.8e-100 370.2 327 67.3
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 3.0e-100 369.4 326 67.8
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.0e-99 366.7 328 66.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.0e-99 366.7 325 65.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 4.4e-99 365.5 322 68.0
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 4.4e-99 365.5 328 61.0
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 5.7e-99 365.2 323 70.0
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.8e-98 362.8 325 66.5
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 6.3e-98 361.7 319 68.0
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 8.2e-98 361.3 327 63.0
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.2e-98 361.3 314 70.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.1e-97 360.9 314 70.1
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 3.1e-97 359.4 323 62.2
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 5.3e-97 358.6 315 69.2
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 5.3e-97 358.6 344 65.7
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 2.0e-96 356.7 327 65.7
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.5e-96 355.9 314 69.4
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 4.5e-96 355.5 323 67.2
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 4.5e-96 355.5 344 65.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 5.9e-96 355.1 360 56.4
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 5.9e-96 355.1 344 64.8
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.0e-95 354.4 322 64.6
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.2e-95 353.2 324 65.1
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-94 350.9 322 66.5
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.9e-94 350.1 322 65.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 7.2e-94 348.2 338 61.8
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.6e-93 347.1 320 67.5
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 2.1e-93 346.7 320 65.3
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.7e-93 346.3 320 64.7
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.7e-93 346.3 326 62.9
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 4.7e-93 345.5 344 56.1
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 6.1e-93 345.1 320 66.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 8.0e-93 344.7 324 61.1
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 1.0e-92 344.4 322 65.8
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.0e-92 344.4 327 64.5
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.4e-92 344.0 326 63.5
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.1e-91 340.9 335 61.2
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 3.3e-91 339.3 321 64.5
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 3.3e-91 339.3 340 57.6
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.7e-91 338.6 317 65.3
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 7.5e-91 338.2 317 65.9
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.3e-90 337.4 321 64.8
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 2.2e-90 336.7 319 62.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.8e-90 336.3 356 54.8
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 3.7e-90 335.9 320 62.8
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 6.3e-90 335.1 329 63.5
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.1e-89 334.3 324 61.7
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 4.1e-89 332.4 340 49.7
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 1.2e-88 330.9 324 59.6
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.7e-88 329.7 327 62.1
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.0e-87 327.8 328 62.2
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.2e-87 326.6 318 64.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.8e-87 325.9 316 64.9
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 5.0e-87 325.5 322 63.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 5.0e-87 325.5 322 63.0
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 6.5e-87 325.1 317 62.8
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.9e-86 323.6 324 63.6
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 5.5e-86 322.0 321 60.7
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 5.5e-86 322.0 318 63.5
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 7.2e-86 321.6 322 62.4
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 9.4e-86 321.2 316 63.0
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 4.7e-85 318.9 320 61.9
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 4.7e-85 318.9 320 61.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 6.1e-85 318.5 326 59.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.8e-84 317.0 324 61.7
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 8.8e-84 314.7 321 54.8
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.2e-83 314.3 322 59.6
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.5e-83 313.9 317 62.1
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 4.4e-83 312.4 325 58.5
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.7e-82 309.3 329 58.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 6.3e-82 308.5 351 47.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 6.3e-82 308.5 338 57.4
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 8.3e-82 308.1 298 65.1
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.0e-80 303.5 309 60.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.8e-76 290.4 286 65.4
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 1.2e-75 287.7 316 57.6
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.4e-73 280.8 318 58.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.4e-73 280.8 318 58.8
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.8e-73 280.4 314 58.9
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.8e-73 280.4 309 58.3
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 1.7e-71 273.9 316 55.4
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.7e-66 256.1 315 52.1
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 5.4e-65 252.3 184 64.1
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 7.8e-64 248.4 167 68.9
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.0e-63 248.1 171 68.4
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 5.6e-62 242.3 320 52.2
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 5.2e-60 235.7 196 57.7
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 5.8e-59 232.3 250 48.4
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 5.4e-57 225.7 170 61.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 7.0e-57 225.3 162 65.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.0e-56 222.2 161 65.2
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.9e-54 217.2 175 60.0
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.5e-54 216.9 320 43.8
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.9e-50 203.4 175 57.7
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.0e-47 194.9 169 55.6
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 2.1e-40 170.6 165 52.1
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.6e-39 165.6 186 47.3
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 8.1e-37 158.7 164 47.0
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 6.8e-36 155.6 214 57.5
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 7.8e-32 142.1 332 37.7
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 3.3e-30 136.7 253 32.4
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 5.8e-27 125.9 169 39.1
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.8e-27 125.9 100 57.0
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.7e-26 124.4 99 62.6
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 8.4e-26 122.1 74 75.7
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 7.9e-24 115.5 74 70.3
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 1.9e-22 110.9 256 46.1
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.5e-22 110.5 339 29.5
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.4e-20 104.8 71 71.8
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.2e-16 91.7 64 68.8
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.0e-15 88.6 64 65.6
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 2.6e-11 73.9 49 71.4
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 4.5e-11 73.2 119 37.8
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.1e-09 68.6 54 64.8
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 1.9e-09 67.8 182 26.4
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 3.0e-07 60.5 151 30.5
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 4.3e-06 56.6 49 55.1
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 5.7e-06 56.2 90 42.2


User provided reference genes

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