Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.5e-95 352.8 179 100.0
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 5.7e-50 201.4 168 61.3
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 1.4e-48 196.8 165 61.2
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 5.9e-47 191.4 165 60.0
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 1.0e-46 190.7 152 59.2
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 1.3e-46 190.3 159 61.0
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 1.3e-46 190.3 171 53.8
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 2.2e-46 189.5 169 58.6
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 2.9e-46 189.1 171 57.3
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 3.8e-46 188.7 171 56.1
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 3.8e-46 188.7 171 57.3
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 9.4e-45 184.1 164 57.3
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 1.2e-44 183.7 152 61.8
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 2.7e-44 182.6 152 61.2
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 1.8e-43 179.9 176 52.3
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 2.3e-43 179.5 163 59.5
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 2.3e-43 179.5 162 58.6
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 3.9e-43 178.7 170 56.5
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 6.7e-43 177.9 158 57.6
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 6.7e-43 177.9 146 62.3
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 8.8e-43 177.6 160 56.9
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 1.5e-42 176.8 167 56.9
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 2.5e-42 176.0 160 56.2
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 2.5e-42 176.0 152 58.6
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 4.3e-42 175.3 167 53.3
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 4.3e-42 175.3 147 59.2
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 7.4e-42 174.5 179 54.7
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 9.7e-42 174.1 166 53.0
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 2.2e-41 172.9 152 57.2
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 2.8e-41 172.6 159 56.0
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 4.8e-41 171.8 152 57.2
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 2.4e-40 169.5 175 51.4
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 2.4e-40 169.5 152 54.6
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 4.1e-40 168.7 152 59.2
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 4.1e-40 168.7 159 52.2
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 4.1e-40 168.7 159 52.2
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 5.3e-40 168.3 166 51.2
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 6.9e-40 167.9 152 55.3
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 2.0e-39 166.4 151 57.0
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.4e-39 165.6 166 48.8
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 5.9e-39 164.9 147 59.2
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 2.9e-38 162.5 175 50.3
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 2.9e-38 162.5 175 48.0
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 3.8e-38 162.2 166 48.2
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 5.0e-38 161.8 151 54.3
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 5.0e-38 161.8 151 53.6
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.1e-37 160.6 166 47.6
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 1.4e-37 160.2 152 53.9
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 2.5e-37 159.5 175 49.1
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 3.2e-37 159.1 143 52.4
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 9.4e-37 157.5 154 48.7
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.2e-36 157.1 159 54.7
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.6e-36 156.8 166 49.4
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 2.1e-36 156.4 159 53.5
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 2.7e-36 156.0 175 48.0
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.7e-36 156.0 154 51.3
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 2.7e-36 156.0 157 53.5
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 3.6e-36 155.6 152 51.3
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 4.7e-36 155.2 152 50.0
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 6.1e-36 154.8 170 47.6
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 5.1e-35 151.8 184 47.3
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 6.7e-35 151.4 167 49.1
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.1e-34 150.6 163 50.9
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 2.0e-34 149.8 151 51.0
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 4.4e-34 148.7 225 42.2
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 1.7e-33 146.7 166 48.2
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 3.7e-33 145.6 167 46.1
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 8.2e-33 144.4 151 48.3
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 9.1e-32 141.0 166 44.6
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 1.2e-31 140.6 163 47.2
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 2.6e-31 139.4 150 45.3
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 3.5e-31 139.0 166 45.2
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.5e-31 139.0 166 43.4
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.0e-30 137.5 164 45.1
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 1.3e-30 137.1 150 50.7
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 2.2e-30 136.3 166 44.0
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 8.5e-30 134.4 175 42.3
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 8.5e-30 134.4 166 43.4
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 1.5e-29 133.7 151 46.4
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 3.2e-29 132.5 146 43.8
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 9.4e-29 131.0 166 42.2
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 1.2e-28 130.6 179 41.3
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 2.7e-28 129.4 106 67.9
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 8.0e-28 127.9 153 43.1
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 4.8e-25 118.6 143 44.1
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 4.1e-24 115.5 118 51.7
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 7.0e-24 114.8 122 54.1
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.6e-23 113.6 122 45.9
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 1.6e-23 113.6 164 41.5
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 3.5e-23 112.5 169 40.8
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 4.0e-19 99.0 96 53.1
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 5.7e-18 95.1 106 47.2
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.7e-17 93.6 115 49.6
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 5.4e-16 88.6 77 59.7
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 5.0e-14 82.0 61 72.1
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 1.1e-13 80.9 93 48.4
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.5e-13 80.5 83 54.2
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 2.1e-12 76.6 91 47.3
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 1.8e-11 73.6 75 48.0
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 5.7e-10 68.6 92 40.2
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 8.3e-09 64.7 70 50.0
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 1.1e-08 64.3 53 56.6
SEGI_16341 Sequoiadendron giganteum HOM05D007367 ORTHO05D008866 2.4e-08 63.2 95 34.7
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 1.6e-07 60.5 141 24.8


User provided reference genes

Program Settings