Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 0.0e+00 1574.3 787 100.0
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 0.0e+00 1264.2 782 79.7
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 0.0e+00 1263.4 779 79.3
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 0.0e+00 1258.4 775 79.4
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 0.0e+00 1255.7 777 80.4
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 0.0e+00 1255.4 779 78.9
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 0.0e+00 1238.0 776 77.8
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 0.0e+00 1238.0 781 77.5
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 0.0e+00 1237.2 776 78.0
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 0.0e+00 1235.7 771 77.4
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 0.0e+00 1235.3 822 74.8
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1234.2 768 78.8
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 0.0e+00 1231.1 779 77.0
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1230.3 768 78.5
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 0.0e+00 1229.5 768 78.4
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 0.0e+00 1227.2 774 76.9
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 0.0e+00 1226.1 774 76.7
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 0.0e+00 1222.6 776 77.7
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 0.0e+00 1216.4 768 76.8
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 0.0e+00 1214.9 816 73.7
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 0.0e+00 1211.1 772 76.7
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 0.0e+00 1209.9 774 75.8
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 0.0e+00 1209.1 822 73.5
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 0.0e+00 1204.1 780 74.4
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 0.0e+00 1203.7 777 75.9
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 0.0e+00 1203.3 781 75.3
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 0.0e+00 1194.5 774 74.8
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 0.0e+00 1192.9 769 75.6
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 0.0e+00 1191.8 769 75.7
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 0.0e+00 1191.0 772 75.3
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 0.0e+00 1187.2 771 75.1
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 0.0e+00 1187.2 779 74.6
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 0.0e+00 1187.2 772 75.8
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 0.0e+00 1186.0 770 74.9
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 0.0e+00 1185.6 768 75.9
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 0.0e+00 1184.1 775 73.8
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 0.0e+00 1182.9 776 74.2
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 0.0e+00 1182.2 769 75.3
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 0.0e+00 1177.9 810 73.3
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 0.0e+00 1177.2 776 74.0
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 0.0e+00 1176.0 767 73.8
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 0.0e+00 1172.1 768 74.3
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 0.0e+00 1171.4 756 76.6
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 0.0e+00 1169.8 767 73.7
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 0.0e+00 1168.3 754 75.7
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 0.0e+00 1167.1 776 74.4
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 0.0e+00 1165.2 772 74.4
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 0.0e+00 1164.8 770 74.7
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 0.0e+00 1164.4 769 74.5
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 0.0e+00 1164.1 772 73.3
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 0.0e+00 1159.4 774 73.9
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 0.0e+00 1158.7 774 74.5
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 0.0e+00 1157.1 774 72.5
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 0.0e+00 1152.9 759 75.6
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 0.0e+00 1152.5 771 73.8
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 0.0e+00 1151.7 762 75.2
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 0.0e+00 1144.4 776 73.5
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 0.0e+00 1140.2 773 72.4
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1136.3 773 72.2
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 0.0e+00 1135.2 881 66.5
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1134.8 771 71.7
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 0.0e+00 1130.9 773 71.7
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 0.0e+00 1130.2 780 70.8
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1129.4 773 71.8
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 0.0e+00 1129.0 771 71.6
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 0.0e+00 1127.9 769 71.5
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 0.0e+00 1126.7 769 71.7
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 0.0e+00 1125.5 766 72.3
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 0.0e+00 1125.2 771 70.7
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 0.0e+00 1122.8 790 71.3
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 0.0e+00 1119.8 767 71.7
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1119.4 771 71.1
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 0.0e+00 1117.4 768 71.5
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 0.0e+00 1113.6 680 79.1
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 0.0e+00 1112.8 777 70.4
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 0.0e+00 1108.2 747 72.6
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 0.0e+00 1107.8 778 71.2
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 0.0e+00 1102.0 766 70.2
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 0.0e+00 1101.7 774 68.7
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 0.0e+00 1100.1 758 73.9
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1099.0 773 69.6
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 0.0e+00 1096.6 767 70.5
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 0.0e+00 1095.9 767 69.9
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 0.0e+00 1077.8 777 68.3
SGA_v2.0_scaffold121G33058 Striga asiatica HOM05D004228 ORTHO05D005137 4.1e-310 1067.8 784 68.9
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 4.5e-309 1064.3 758 71.5
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 4.2e-307 1057.7 775 67.5
Medtr3g437740 Medicago truncatula HOM05D004228 ORTHO05D005137 2.1e-306 1055.4 695 74.2
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 2.7e-306 1055.0 777 67.1
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 2.0e-304 1048.9 781 67.3
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 2.8e-303 1045.0 780 66.7
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.9e-299 1032.3 766 67.4
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 4.2e-299 1031.2 775 66.8
FAN02G0630 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.7e-295 1019.2 693 72.7
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 3.5e-293 1011.5 773 67.5
Eucgr.J03134 Eucalyptus grandis HOM05D004228 ORTHO05D005137 7.7e-293 1010.4 663 74.8
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 6.5e-292 1007.3 736 68.2
Nitab4.5_0000030g0500 Nicotiana tabacum HOM05D004228 ORTHO05D005137 4.1e-286 988.0 658 75.8
Nitab4.5_0002244g0120 Nicotiana tabacum HOM05D004228 ORTHO05D005137 5.9e-285 984.2 630 78.3
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 3.2e-283 978.4 743 64.7
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 3.6e-282 974.9 748 66.6
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 1.8e-281 972.6 759 63.9
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 1.8e-281 972.6 766 61.6
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 3.4e-280 968.4 766 63.2
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 5.6e-275 951.0 782 63.7
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 3.5e-253 878.6 706 62.0
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 1.1e-246 857.1 673 64.2
Lsat_1_v5_gn_0_21180 Lactuca sativa HOM05D004228 ORTHO05D005137 2.7e-245 852.4 643 65.9
Manes.11G069700 Manihot esculenta HOM05D004228 ORTHO05D005137 1.5e-240 836.6 603 70.6
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 8.7e-236 820.8 561 71.7
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla HOM05D004228 ORTHO05D005137 3.0e-228 795.8 517 74.5
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 9.0e-217 757.7 757 55.2
Oeu057157.1 Olea europaea HOM05D004228 ORTHO05D005137 4.6e-205 718.8 439 79.7
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea HOM05D004228 ORTHO05D005137 3.7e-186 656.0 442 72.2
PSO017G2203 Papaver somniferum HOM05D004228 ORTHO05D005137 1.2e-149 534.6 349 72.8
PSO017G5477 Papaver somniferum HOM05D004228 ORTHO05D005137 6.2e-149 532.3 371 73.0
MBI14_g16439_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 9.8e-147 525.0 604 49.3
SEGI_32687 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 6.4e-122 442.6 346 61.6
COL.COLO4_26790 Corchorus olitorius HOM05D004228 ORTHO05D005137 2.1e-120 437.6 268 79.9
Cpa.g.sc167.19 Carica papaya HOM05D004228 ORTHO05D005137 6.2e-101 372.9 248 71.0
Lsat_1_v5_gn_3_49001 Lactuca sativa HOM05D004228 ORTHO05D005137 2.3e-95 354.4 250 69.6
COL.COLO4_26791 Corchorus olitorius HOM05D004228 ORTHO05D005137 3.1e-76 290.8 356 46.1
MBI14_g16438_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 3.5e-75 287.3 197 69.5
RcHm_v2.0_Chr2g0132171 Rosa chinensis HOM05D004228 ORTHO05D005137 9.4e-73 279.3 260 60.8
MD09G1228800 Malus domestica HOM05D004228 ORTHO05D005137 2.1e-72 278.1 266 56.4
Lsat_1_v5_gn_6_87921 Lactuca sativa HOM05D004228 ORTHO05D005137 9.7e-70 269.2 216 67.1
Gorai.007G245800 Gossypium raimondii HOM05D004228 ORTHO05D005137 3.5e-67 260.8 159 76.1
MD00G1188200 Malus domestica HOM05D004228 ORTHO05D005137 7.2e-65 253.1 252 55.2
Gorai.008G198300 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.0e-63 249.2 141 80.9
CBR_g49119 Chara braunii HOM05D004228 ORTHO05D005137 1.8e-60 238.4 229 51.5
Gohir.D12G184901 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.1e-60 237.7 141 78.0
Nitab4.5_0002244g0110 Nicotiana tabacum HOM05D004228 ORTHO05D005137 6.1e-48 196.8 118 79.7
Gorai.006G048700 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.5e-46 192.2 109 78.9
Nitab4.5_0000030g0490 Nicotiana tabacum HOM05D004228 ORTHO05D005137 1.5e-46 192.2 115 80.0
CBR_g49120 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-46 191.8 211 50.2
Oeu057158.1 Olea europaea HOM05D004228 ORTHO05D005137 2.2e-45 188.3 106 82.1
CBR_g49132 Chara braunii HOM05D004228 ORTHO05D005137 2.8e-45 188.0 159 58.5
Glyma.20G046501 Glycine max HOM05D004228 ORTHO05D005137 7.0e-44 183.3 150 62.0
Cfa001845 Carpinus fangiana HOM05D004228 ORTHO05D005137 3.5e-43 181.0 117 76.1
SEGI_21553 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 8.0e-40 169.9 101 77.2
SEGI_04747 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.8e-39 168.7 108 69.4
SEGI_17966 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 6.4e-37 160.2 117 64.1
FAN02G0140 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.6e-35 155.6 87 81.6
MD09G1229100 Malus domestica HOM05D004228 ORTHO05D005137 3.9e-34 151.0 85 78.8
Gorai.002G214900 Gossypium raimondii HOM05D004228 ORTHO05D005137 3.6e-32 144.4 82 78.0
Gohir.A06G076350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 8.0e-32 143.3 101 69.3
Gohir.D02G099801 Gossypium hirsutum HOM05D004228 ORTHO05D005137 8.0e-32 143.3 101 69.3
CBR_g49131 Chara braunii HOM05D007088 ORTHO05D008477 1.1e-31 142.9 95 68.4
Gohir.A07G034550 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.4e-31 142.5 101 68.3
Glyma.20G046401 Glycine max HOM05D004228 ORTHO05D005137 1.2e-30 139.4 95 71.6
Gohir.A05G304350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.2e-30 139.4 86 75.6
Gohir.D13G121066 Gossypium hirsutum HOM05D004228 ORTHO05D005137 4.9e-29 134.0 82 72.0
CDE02G2004 Ceratophyllum demersum HOM05D004228 ORTHO05D005137 3.2e-28 131.3 104 64.4
Gohir.D09G001001 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.3e-23 115.2 218 36.2
Lsat_1_v5_gn_5_149700 Lactuca sativa HOM05D004228 ORTHO05D016156 2.3e-23 115.2 176 41.5
SEGI_15998 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 5.2e-23 114.0 76 68.4
MD00G1188000 Malus domestica HOM05D004228 ORTHO05D005137 6.8e-23 113.6 72 70.8
Gorai.009G406300 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.3e-21 109.4 218 35.3
MCO12G087 Micromonas commoda HOM05D004228 ORTHO05D005137 3.7e-21 107.8 162 39.5
Actinidia00024 Actinidia chinensis HOM05D000639 ORTHO05D019441 1.6e-16 92.4 120 45.8
MBI14_g16442_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 1.7e-13 82.4 55 65.5
Gohir.A11G044150 Gossypium hirsutum HOM05D004228 ORTHO05D005137 8.4e-13 80.1 55 70.9
Lsat_1_v5_gn_4_114980 Lactuca sativa HOM05D004228 ORTHO05D005137 1.7e-10 72.4 59 62.7
Cpa.g.sc167.21 Carica papaya HOM05D004228 ORTHO05D043558 2.1e-08 65.5 37 70.3
Cre08.g381800 Chlamydomonas reinhardtii HOM05D004228 ORTHO05D005137 8.1e-08 63.5 151 33.1
Pp3c5_70 Physcomitrium patens HOM05D004228 ORTHO05D005137 4.0e-07 61.2 43 55.8


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