Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 4123.2 2146 100.0
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2501.9 2168 63.2
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2404.0 2173 60.4
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2382.8 2182 59.1
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2362.0 2200 59.5
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2352.0 2174 60.1
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 2348.2 2175 60.1
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2346.2 2181 59.7
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2341.6 2180 58.5
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2327.0 2184 59.3
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2307.7 2188 57.7
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 2285.4 2176 59.5
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2283.8 2178 57.9
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 2274.2 2176 58.7
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2259.6 2196 57.3
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2258.0 2193 57.2
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 2256.9 2173 58.5
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2247.6 2176 57.3
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2242.2 2009 59.9
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2240.3 2174 57.2
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2228.0 2191 55.9
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2218.0 2196 56.9
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 2212.6 2177 57.1
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 2210.3 2181 57.2
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2200.6 2197 56.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2200.2 2179 55.3
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2195.2 2190 55.8
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2172.9 2274 54.7
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2169.8 2176 56.2
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2164.0 2180 54.9
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2156.3 2180 54.9
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2141.3 2186 54.9
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2137.5 2178 54.5
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 2133.2 2184 55.2
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2130.5 2180 55.0
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2130.5 2184 54.6
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2129.0 2178 54.2
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2103.2 2177 53.7
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 2101.2 2172 54.9
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2091.6 2177 53.8
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2083.5 2181 54.2
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2083.1 2189 53.9
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2063.1 2178 53.3
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2059.6 2257 53.2
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 2054.6 2154 54.5
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 2050.8 2199 52.8
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2040.8 2201 53.4
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 2032.7 2128 53.3
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1996.1 2095 53.0
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1995.3 1902 57.9
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1986.1 2025 55.4
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 1978.4 1957 56.7
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1974.5 1986 57.0
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1966.0 2156 52.1
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 1957.2 2191 51.8
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 1934.8 2193 51.3
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1926.4 1962 57.5
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 1922.9 2104 52.2
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1884.0 2288 49.7
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1837.8 1859 55.5
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 1826.6 2052 50.5
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1800.8 2195 49.3
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1773.1 1866 54.1
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1770.0 1867 54.0
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1765.4 2190 48.6
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1723.8 1670 58.3
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1715.7 2261 46.1
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1713.7 2137 48.5
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 1691.4 1685 56.0
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1682.5 2106 47.7
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1522.3 1974 44.6
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1495.3 1509 54.1
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1402.5 1752 48.6
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1338.2 2306 39.6
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1322.0 1695 48.0
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1300.8 1712 46.7
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1296.2 1126 61.2
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1286.2 1703 47.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1277.7 1803 42.3
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1254.2 1564 47.6
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1198.3 2263 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1180.6 1942 39.1
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.6e-292 1010.7 1147 50.6
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 2.6e-290 1003.4 1030 55.1
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 2.2e-289 1000.3 969 57.6
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 1.0e-286 991.5 1307 44.5
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 2.6e-282 976.9 1033 53.0
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 2.9e-257 893.6 1129 48.7
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.8e-252 877.1 955 50.3
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 6.0e-247 859.4 1388 38.5
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 3.2e-216 757.3 2517 28.8
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.5e-213 748.4 902 48.0
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 5.7e-205 719.9 508 70.9
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 1.8e-203 714.9 634 59.8
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 6.3e-188 663.3 1455 32.6
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 4.1e-187 660.6 502 66.5
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 5.2e-150 537.3 412 67.2
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 6.0e-138 497.3 377 66.0
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 3.7e-111 408.3 563 48.0
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.4e-110 406.4 341 64.5
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 4.2e-107 394.8 403 53.3
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 3.5e-106 391.7 403 53.1
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 5.7e-104 384.4 221 82.4
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 2.6e-101 375.6 348 59.2
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 2.6e-101 375.6 216 81.9
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 7.4e-96 357.5 230 76.1
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 5.0e-92 344.7 363 55.1
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 9.7e-88 330.5 182 84.1
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.5e-72 280.0 362 51.1
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 3.7e-71 275.4 305 58.7
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 2.2e-68 266.2 379 51.5
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 5.9e-61 241.5 128 87.5
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.5e-59 236.9 551 34.1
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 4.5e-53 215.3 202 55.4
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.7e-52 213.4 148 67.6
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.1e-50 206.5 160 70.0
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 1.4e-49 203.8 204 65.7
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 1.4e-49 203.8 160 71.9
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.5e-43 183.0 120 74.2
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.3e-43 182.6 120 73.3
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 8.9e-41 174.5 284 39.8
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 2.9e-39 169.5 144 67.4
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 5.6e-35 155.2 338 42.3
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.3e-33 149.8 73 87.7
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.3e-33 149.8 73 87.7
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 3.0e-28 132.9 115 57.4
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.9e-27 130.2 133 52.6
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.5e-27 129.8 64 85.9
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 2.6e-24 119.8 212 39.2
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.9e-23 116.3 366 36.3
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.6e-21 109.0 176 46.0
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 8.6e-20 104.8 55 90.9
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 1.1e-19 104.4 85 62.4
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 5.6e-19 102.1 79 65.8
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 7.3e-19 101.7 57 82.5
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 9.0e-17 94.7 65 69.2
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 1.2e-16 94.4 136 44.9
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 2.6e-16 93.2 53 81.1
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 3.9e-12 79.3 148 36.5
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.3e-11 76.3 55 72.7
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.1e-10 73.6 71 64.8
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.1e-09 71.2 51 62.7
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 1.1e-09 71.2 51 62.7
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.0e-08 67.0 54 61.1
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 5.8e-08 65.5 59 61.0
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 7.1e-06 58.5 66 50.0


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