Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05490 Coffea canephora HOM05D000626 ORTHO05D003868 1.2e-74 283.1 148 100.0
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 1.9e-14 83.2 132 48.5
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 4.6e-13 78.6 132 44.7
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 3.0e-12 75.9 132 43.9
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 3.9e-12 75.5 132 43.2
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 5.1e-12 75.1 115 47.8
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 1.1e-11 73.9 139 40.3
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.1e-11 73.9 120 44.2
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.5e-11 73.6 115 47.0
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.5e-11 73.6 139 41.7
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 1.5e-11 73.6 139 40.3
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.9e-11 73.2 115 47.0
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 1.9e-11 73.2 115 47.0
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.9e-11 73.2 115 47.0
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.9e-11 73.2 139 40.3
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.9e-11 73.2 139 39.6
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 2.5e-11 72.8 129 45.0
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 2.5e-11 72.8 137 40.1
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 3.3e-11 72.4 115 46.1
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 3.3e-11 72.4 115 46.1
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 3.3e-11 72.4 137 41.6
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 3.3e-11 72.4 139 40.3
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 3.3e-11 72.4 139 39.6
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 4.3e-11 72.0 115 46.1
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 4.3e-11 72.0 115 46.1
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.3e-11 72.0 132 41.7
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 4.3e-11 72.0 137 42.3
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 4.3e-11 72.0 120 43.3
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 4.3e-11 72.0 115 46.1
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 5.6e-11 71.6 132 42.4
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 5.6e-11 71.6 139 39.6
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 5.6e-11 71.6 139 39.6
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 5.6e-11 71.6 115 46.1
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 5.6e-11 71.6 115 46.1
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 5.6e-11 71.6 115 46.1
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 5.6e-11 71.6 115 46.1
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 7.3e-11 71.2 115 46.1
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 7.3e-11 71.2 115 46.1
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 7.3e-11 71.2 132 41.7
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 7.3e-11 71.2 120 42.5
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 7.3e-11 71.2 137 38.7
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 9.5e-11 70.9 115 45.2
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 9.5e-11 70.9 139 40.3
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 9.5e-11 70.9 137 40.1
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 9.5e-11 70.9 122 43.4
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.2e-10 70.5 137 40.1
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.6e-10 70.1 137 40.1
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 1.6e-10 70.1 129 42.6
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 1.6e-10 70.1 139 41.0
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 2.1e-10 69.7 137 38.0
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 2.1e-10 69.7 137 39.4
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 2.1e-10 69.7 126 41.3
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 2.1e-10 69.7 132 40.2
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 2.8e-10 69.3 115 45.2
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 2.8e-10 69.3 139 38.8
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 2.8e-10 69.3 122 42.6
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 3.6e-10 68.9 137 39.4
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 3.6e-10 68.9 137 38.7
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.6e-10 68.9 120 42.5
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 4.7e-10 68.6 132 40.2
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 4.7e-10 68.6 139 38.8
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 4.7e-10 68.6 117 44.4
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.7e-10 68.6 137 38.7
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 4.7e-10 68.6 139 38.8
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 6.2e-10 68.2 137 38.7
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 8.1e-10 67.8 139 38.1
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 8.1e-10 67.8 139 38.8
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 1.1e-09 67.4 115 45.2
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.1e-09 67.4 137 39.4
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 1.1e-09 67.4 132 41.7
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.4e-09 67.0 122 41.8
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.4e-09 67.0 137 38.7
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 1.4e-09 67.0 139 38.1
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.4e-09 67.0 120 40.8
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.4e-09 67.0 120 42.5
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 1.4e-09 67.0 115 44.3
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 2.4e-09 66.2 122 41.0
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 2.4e-09 66.2 137 37.2
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 3.1e-09 65.9 115 45.2
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 3.1e-09 65.9 139 38.1
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 3.1e-09 65.9 132 40.9
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 3.1e-09 65.9 139 38.1
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 3.1e-09 65.9 120 39.2
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 3.1e-09 65.9 120 41.7
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 3.1e-09 65.9 132 40.9
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 3.1e-09 65.9 120 40.0
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 3.1e-09 65.9 122 40.2
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 4.0e-09 65.5 139 37.4
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 4.0e-09 65.5 132 40.9
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 4.0e-09 65.5 120 43.3
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 5.2e-09 65.1 139 38.1
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 6.8e-09 64.7 122 40.2
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 6.8e-09 64.7 139 38.1
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 6.8e-09 64.7 122 41.0
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 6.8e-09 64.7 137 39.4
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 6.8e-09 64.7 137 39.4
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 6.8e-09 64.7 120 41.7
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.8e-09 64.7 139 38.8
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 8.9e-09 64.3 117 43.6
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 1.2e-08 63.9 122 39.3
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.5e-08 63.5 115 43.5
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 2.0e-08 63.2 132 40.2
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.6e-08 62.8 115 40.9
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.6e-08 62.8 120 40.8
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 2.6e-08 62.8 120 40.8
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.6e-08 62.8 135 37.8
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.6e-08 62.8 120 42.5
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 2.6e-08 62.8 116 41.4
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 2.6e-08 62.8 115 43.5
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.4e-08 62.4 130 36.9
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 3.4e-08 62.4 120 37.5
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.4e-08 62.4 115 40.9
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 3.4e-08 62.4 130 38.5
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 3.4e-08 62.4 122 41.0
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.4e-08 62.0 137 37.2
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 4.4e-08 62.0 128 39.8
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 5.8e-08 61.6 117 42.7
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 5.8e-08 61.6 127 38.6
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 7.6e-08 61.2 109 44.0
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.9e-08 60.8 112 40.2
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.3e-07 60.5 132 38.6
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.7e-07 60.1 132 39.4
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 1.7e-07 60.1 114 42.1
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.7e-07 60.1 149 34.9
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 2.9e-07 59.3 120 39.2
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 2.9e-07 59.3 120 40.8
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 2.9e-07 59.3 115 43.5
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.9e-07 59.3 115 43.5
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 3.8e-07 58.9 132 37.1
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 3.8e-07 58.9 122 38.5
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.9e-07 58.5 137 35.8
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.9e-07 58.5 120 38.3
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 6.4e-07 58.2 112 37.5
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 8.4e-07 57.8 120 36.7
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.9e-06 56.6 137 33.6
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.9e-06 56.6 115 35.7
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 2.4e-06 56.2 111 39.6
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 2.4e-06 56.2 163 34.4
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 5.4e-06 55.1 158 34.2
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 7.1e-06 54.7 117 36.8
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 7.1e-06 54.7 107 40.2


User provided reference genes

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