Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05410 Coffea canephora HOM05D000595 ORTHO05D004141 9.0e-47 189.9 94 100.0
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 2.3e-18 95.5 66 65.2
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 3.0e-18 95.1 66 69.7
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 3.0e-18 95.1 66 68.2
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 8.7e-18 93.6 66 65.2
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 8.7e-18 93.6 66 66.7
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 1.1e-17 93.2 66 63.6
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 1.5e-17 92.8 71 59.2
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.5e-17 92.8 68 63.2
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.5e-17 92.8 68 63.2
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 1.9e-17 92.4 71 59.2
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 2.5e-17 92.0 71 57.7
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.3e-17 91.7 71 59.2
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 4.3e-17 91.3 66 65.2
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 4.3e-17 91.3 68 61.8
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 5.7e-17 90.9 68 64.7
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 5.7e-17 90.9 68 64.7
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 5.7e-17 90.9 66 65.2
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 7.4e-17 90.5 66 62.1
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 7.4e-17 90.5 71 59.2
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 9.7e-17 90.1 71 57.7
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 1.3e-16 89.7 66 65.2
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 1.3e-16 89.7 66 66.7
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.6e-16 89.4 66 63.6
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 1.6e-16 89.4 66 63.6
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 2.2e-16 89.0 64 64.1
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 2.2e-16 89.0 71 60.6
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 2.2e-16 89.0 66 65.2
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 2.8e-16 88.6 66 65.2
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 2.8e-16 88.6 66 65.2
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 3.7e-16 88.2 66 62.1
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 3.7e-16 88.2 66 63.6
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 3.7e-16 88.2 66 62.1
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 3.7e-16 88.2 71 59.2
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 3.7e-16 88.2 71 56.3
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 6.3e-16 87.4 68 61.8
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 6.3e-16 87.4 66 63.6
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 6.3e-16 87.4 65 60.0
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 8.2e-16 87.0 66 59.1
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 8.2e-16 87.0 71 54.9
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 8.2e-16 87.0 68 58.8
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 1.1e-15 86.7 65 66.2
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.1e-15 86.7 65 66.2
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 1.1e-15 86.7 66 59.1
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.1e-15 86.7 66 59.1
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 1.1e-15 86.7 66 57.6
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.4e-15 86.3 71 54.9
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 1.8e-15 85.9 65 60.0
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 1.8e-15 85.9 64 60.9
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.8e-15 85.9 65 63.1
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 1.8e-15 85.9 66 59.1
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 1.8e-15 85.9 68 61.8
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.4e-15 85.5 65 61.5
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.4e-15 85.5 82 54.9
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 2.4e-15 85.5 66 60.6
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 2.4e-15 85.5 71 57.7
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 2.4e-15 85.5 66 60.6
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 3.1e-15 85.1 66 59.1
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 3.1e-15 85.1 65 61.5
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 4.1e-15 84.7 65 60.0
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 4.1e-15 84.7 66 59.1
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 4.1e-15 84.7 66 60.6
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 4.1e-15 84.7 66 60.6
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 4.1e-15 84.7 84 52.4
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 5.3e-15 84.3 69 55.1
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 5.3e-15 84.3 69 55.1
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 5.3e-15 84.3 71 53.5
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 5.3e-15 84.3 71 57.7
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 6.9e-15 84.0 69 53.6
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 6.9e-15 84.0 66 59.1
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 6.9e-15 84.0 66 59.1
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 9.0e-15 83.6 69 55.1
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 9.0e-15 83.6 69 53.6
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 9.0e-15 83.6 66 60.6
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 9.0e-15 83.6 69 56.5
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 1.2e-14 83.2 69 52.2
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 1.2e-14 83.2 66 59.1
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 1.5e-14 82.8 66 57.6
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.5e-14 82.8 67 59.7
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 2.0e-14 82.4 84 51.2
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 2.6e-14 82.0 69 53.6
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 2.6e-14 82.0 65 56.9
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 2.6e-14 82.0 67 58.2
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 2.6e-14 82.0 66 54.5
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 3.4e-14 81.6 69 49.3
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 3.4e-14 81.6 69 52.2
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 5.9e-14 80.9 65 55.4
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 5.9e-14 80.9 66 57.6
Cpa.g.sc71.52 Carica papaya HOM05D000595 ORTHO05D004141 7.7e-14 80.5 68 58.8
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 1.0e-13 80.1 65 55.4
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 1.0e-13 80.1 60 65.0
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 1.0e-13 80.1 65 56.9
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 1.3e-13 79.7 66 56.1
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 1.3e-13 79.7 64 54.7
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 2.2e-13 79.0 69 47.8
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 2.9e-13 78.6 69 49.3
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 2.9e-13 78.6 69 49.3
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 2.9e-13 78.6 69 49.3
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 2.9e-13 78.6 66 50.0
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 3.8e-13 78.2 65 55.4
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 3.8e-13 78.2 66 56.1
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 3.8e-13 78.2 61 59.0
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 5.0e-13 77.8 71 53.5
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 5.0e-13 77.8 81 50.6
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 6.5e-13 77.4 69 49.3
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 1.1e-12 76.6 65 53.8
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.1e-12 76.6 68 52.9
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.6e-11 72.8 60 58.3
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 4.6e-11 71.2 61 49.2
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.0e-10 70.1 68 51.5
Haze_07994 Corylus avellana HOM05D000595 ORTHO05D004141 3.9e-10 68.2 37 78.4
vmacro00079 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 5.1e-10 67.8 37 78.4
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 9.7e-09 63.5 66 48.5
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.7e-08 62.8 42 64.3
GSVIVG01013642001 Vitis vinifera HOM05D000595 ORTHO05D004141 8.2e-08 60.5 42 64.3
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.8e-07 59.3 57 50.9
Mapoly0633s0002 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.8e-07 59.3 57 50.9
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.1e-07 58.5 64 48.4
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 3.4e-06 55.1 50 56.0
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 5.9e-06 54.3 64 46.9


User provided reference genes

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