Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05120 Coffea canephora HOM05D003716 ORTHO05D006233 2.6e-14 80.9 42 100.0
Cc00_g35800 Coffea canephora HOM05D003716 ORTHO05D006233 4.2e-12 73.6 40 95.0
Cc08_g05110 Coffea canephora HOM05D003716 ORTHO05D006233 4.6e-11 70.1 40 92.5
Migut.E00351 Erythranthe guttata HOM05D003716 ORTHO05D006233 3.7e-08 60.5 39 79.5
Gorai.013G117300 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.1e-07 58.9 37 81.1
Potri.003G175366 Populus trichocarpa HOM05D003716 ORTHO05D006233 1.1e-07 58.9 37 75.7
Cc02_g22340 Coffea canephora HOM05D003716 ORTHO05D006233 1.4e-07 58.5 37 81.1
Gohir.D13G104706 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.4e-07 58.5 37 81.1
Cc03_g00810 Coffea canephora HOM05D003716 ORTHO05D006233 1.8e-07 58.2 37 81.1
Cc11_g08930 Coffea canephora HOM05D003716 ORTHO05D006233 1.8e-07 58.2 40 80.0
Oeu012848.1 Olea europaea HOM05D003716 ORTHO05D006233 1.8e-07 58.2 40 67.5
arahy.Tifrunner.gnm1.ann1.CF0C3I Arachis hypogaea HOM05D003716 ORTHO05D006233 3.1e-07 57.4 39 74.4
Cc02_g22370 Coffea canephora HOM05D003716 ORTHO05D006233 3.1e-07 57.4 38 81.6
Gorai.001G025400 Gossypium raimondii HOM05D003716 ORTHO05D006233 3.1e-07 57.4 40 75.0
Lj1g0005700 Lotus japonicus HOM05D003716 ORTHO05D006233 4.0e-07 57.0 39 74.4
CiPaw.02G167700 Carya illinoinensis HOM05D003716 ORTHO05D006233 5.3e-07 56.6 39 74.4
Gorai.005G187200 Gossypium raimondii HOM05D003716 ORTHO05D006233 5.3e-07 56.6 36 80.6
Prupe.1G117300 Prunus persica HOM05D003716 ORTHO05D006233 6.9e-07 56.2 37 75.7
Prupe.8G171300 Prunus persica HOM05D003716 ORTHO05D006233 6.9e-07 56.2 36 75.0
GSVIVG01013220001 Vitis vinifera HOM05D003716 ORTHO05D006233 6.9e-07 56.2 30 93.3
CiPaw.02G082200 Carya illinoinensis HOM05D003716 ORTHO05D006233 9.0e-07 55.8 35 77.1
Glyma.15G253600 Glycine max HOM05D003716 ORTHO05D006233 9.0e-07 55.8 40 67.5
Gohir.D07G024233 Gossypium hirsutum HOM05D003716 ORTHO05D006233 9.0e-07 55.8 30 93.3
Gorai.001G025100 Gossypium raimondii HOM05D003716 ORTHO05D006233 9.0e-07 55.8 40 75.0
Gorai.001G025200 Gossypium raimondii HOM05D003716 ORTHO05D006233 9.0e-07 55.8 30 93.3
Gohir.A02G052302 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.2e-06 55.5 30 93.3
Gohir.A07G022217 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.2e-06 55.5 40 72.5
Gohir.D11G248340 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.2e-06 55.5 28 96.4
Gorai.007G264800 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.2e-06 55.5 28 96.4
Manes.02G142350 Manihot esculenta HOM05D003716 ORTHO05D006233 1.2e-06 55.5 30 90.0
Manes.06G007001 Manihot esculenta HOM05D003716 ORTHO05D006233 1.2e-06 55.5 37 78.4
Phvul.011G166700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 1.2e-06 55.5 39 66.7
GSVIVG01013223001 Vitis vinifera HOM05D003716 ORTHO05D006233 1.2e-06 55.5 36 77.8
GSVIVG01013224001 Vitis vinifera HOM05D003716 ORTHO05D006233 1.2e-06 55.5 36 77.8
Gohir.A07G022221 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.5e-06 55.1 40 72.5
Gohir.A11G237900 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.5e-06 55.1 28 96.4
Gohir.A13G101205 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.5e-06 55.1 37 75.7
Gohir.D02G057128 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.5e-06 55.1 30 90.0
Manes.11G047250 Manihot esculenta HOM05D003716 ORTHO05D006233 1.5e-06 55.1 27 100.0
Prupe.1G384300 Prunus persica HOM05D003716 ORTHO05D006233 2.0e-06 54.7 36 77.8
GSVIVG01007699001 Vitis vinifera HOM05D001815 ORTHO05D001830 2.0e-06 54.7 36 75.0
CARHR168090 Cardamine hirsuta HOM05D003716 ORTHO05D006233 2.6e-06 54.3 29 86.2
AL5G45860 Arabidopsis lyrata HOM05D003716 ORTHO05D006233 3.4e-06 53.9 27 92.6
AT3G57770 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 3.4e-06 53.9 27 92.6
FAN12G3908 Fragaria x ananassa HOM05D003716 ORTHO05D006233 3.4e-06 53.9 36 72.2
Gohir.A11G239260 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-06 53.9 26 100.0
Gohir.D11G249166 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.4e-06 53.9 26 100.0
Oeu018531.1 Olea europaea HOM05D003716 ORTHO05D006233 3.4e-06 53.9 36 72.2
Prupe.8G172100 Prunus persica HOM05D003716 ORTHO05D006233 3.4e-06 53.9 36 72.2
GSVIVG01013210001 Vitis vinifera HOM05D003716 ORTHO05D006233 3.4e-06 53.9 27 96.3
AT1G16820 Arabidopsis thaliana HOM05D003490 ORTHO05D026861 4.5e-06 53.5 26 96.2
Migut.N02117 Erythranthe guttata HOM05D003716 ORTHO05D006233 4.5e-06 53.5 26 96.2
Migut.N02390 Erythranthe guttata HOM05D003716 ORTHO05D006233 4.5e-06 53.5 26 96.2
Glyma.20G101900 Glycine max HOM05D003716 ORTHO05D006233 4.5e-06 53.5 26 96.2
Gorai.005G064400 Gossypium raimondii HOM05D003716 ORTHO05D006233 4.5e-06 53.5 30 86.7
Manes.05G096850 Manihot esculenta HOM05D003716 ORTHO05D006233 4.5e-06 53.5 27 96.3
Phvul.011G191200 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.5e-06 53.5 39 64.1
Sed0025894 Sechium edule HOM05D003716 ORTHO05D006233 4.5e-06 53.5 27 96.3
Sopen02g031340 Solanum pennellii HOM05D003716 ORTHO05D006233 4.5e-06 53.5 26 96.2
GSVIVG01013209001 Vitis vinifera HOM05D003716 ORTHO05D006233 4.5e-06 53.5 38 73.7
BraA03t10566Z Brassica rapa HOM05D003716 ORTHO05D006233 5.8e-06 53.1 41 63.4
Cc00_g27890 Coffea canephora HOM05D003716 ORTHO05D006233 5.8e-06 53.1 40 72.5
Glyma.06G203600 Glycine max HOM05D003716 ORTHO05D006233 5.8e-06 53.1 27 92.6
Gohir.A07G022205 Gossypium hirsutum HOM05D003716 ORTHO05D006233 5.8e-06 53.1 40 65.0
Phvul.003G120550 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 5.8e-06 53.1 40 67.5
Phvul.011G190000 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 5.8e-06 53.1 39 69.2
Phvul.011G190900 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 5.8e-06 53.1 29 86.2
Ciclev10027385m.g Citrus clementina HOM05D003716 ORTHO05D006233 7.6e-06 52.8 40 67.5
Gohir.A02G051801 Gossypium hirsutum HOM05D003716 ORTHO05D006233 7.6e-06 52.8 30 86.7
Phvul.007G073700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 7.6e-06 52.8 27 88.9
Phvul.011G146100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 7.6e-06 52.8 27 92.6
Phvul.011G191100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 7.6e-06 52.8 28 85.7
Sabra16G0159800 Salix brachista HOM05D033798 ORTHO05D006233 7.6e-06 52.8 26 96.2
A08p31790 Brassica napus HOM05D003716 ORTHO05D006233 1.0e-05 52.4 27 88.9
C03p14710 Brassica napus HOM05D003716 ORTHO05D006233 1.0e-05 52.4 27 88.9
CiPaw.02G098700 Carya illinoinensis HOM05D003716 ORTHO05D006233 1.0e-05 52.4 29 89.7
ClCG03G014910 Citrullus lanatus HOM05D000025 ORTHO05D002339 1.0e-05 52.4 26 96.2
Gohir.D02G057325 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.0e-05 52.4 28 89.3
Gorai.005G062900 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.0e-05 52.4 28 89.3
GSVIVG01013212001 Vitis vinifera HOM05D003716 ORTHO05D006233 1.0e-05 52.4 36 75.0
GSVIVG01013214001 Vitis vinifera HOM05D003716 ORTHO05D006233 1.0e-05 52.4 39 66.7


User provided reference genes

Program Settings