Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.7e-58 229.2 120 100.0
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 6.3e-29 131.0 108 67.6
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-28 129.8 105 67.6
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.8e-28 129.4 119 60.5
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.1e-28 128.6 98 70.4
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 4.1e-28 128.3 105 66.7
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.1e-28 128.3 119 60.5
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.3e-28 127.9 107 64.5
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 5.3e-28 127.9 119 61.3
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 7.0e-28 127.5 102 67.6
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.2e-27 126.7 106 67.9
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.6e-27 126.3 106 65.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-27 125.6 112 62.5
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.6e-27 125.6 112 62.5
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.6e-27 125.6 111 60.4
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 5.9e-27 124.4 134 56.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.0e-26 123.6 106 63.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.0e-26 123.6 119 58.0
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.0e-26 123.6 134 56.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.0e-26 123.6 92 67.4
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 3.8e-26 121.7 134 54.5
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.0e-26 121.3 108 60.2
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.5e-26 120.9 93 69.9
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.5e-26 120.9 109 60.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.5e-25 119.8 97 62.9
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-25 119.4 112 58.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.2e-25 118.6 86 69.8
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 4.2e-25 118.2 111 60.4
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 5.5e-25 117.9 107 59.8
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 5.5e-25 117.9 101 62.4
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 7.2e-25 117.5 110 59.1
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 7.2e-25 117.5 110 59.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.2e-24 116.7 127 52.8
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-24 116.7 106 63.2
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.6e-24 116.3 116 51.7
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.6e-24 116.3 113 56.6
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.1e-24 115.9 96 61.5
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 2.1e-24 115.9 97 62.9
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.7e-24 115.5 108 61.1
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.7e-24 115.5 98 59.2
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.7e-24 115.5 109 56.9
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.7e-24 115.5 83 68.7
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.6e-24 115.2 97 59.8
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 4.7e-24 114.8 96 64.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 4.7e-24 114.8 96 64.6
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 4.7e-24 114.8 89 66.3
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.7e-24 114.8 83 68.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.0e-23 113.6 107 55.1
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.0e-23 113.6 96 64.6
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.0e-23 113.6 88 63.6
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.4e-23 113.2 94 60.6
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.4e-23 113.2 94 60.6
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-23 112.8 94 60.6
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-23 112.8 94 60.6
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.8e-23 112.8 94 60.6
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.8e-23 112.8 88 63.6
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.8e-23 112.8 112 55.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.3e-23 112.5 89 64.0
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.3e-23 112.5 108 53.7
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-23 112.1 98 60.2
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-23 112.1 94 60.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.0e-23 112.1 118 54.2
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.0e-23 112.1 88 64.8
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.0e-23 111.7 107 56.1
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 5.2e-23 111.3 118 54.2
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 6.7e-23 110.9 107 55.1
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 8.8e-23 110.5 80 70.0
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 8.8e-23 110.5 97 59.8
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 8.8e-23 110.5 107 55.1
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 8.8e-23 110.5 107 55.1
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.2e-22 110.2 94 58.5
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.2e-22 110.2 102 58.8
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.5e-22 109.8 96 59.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.5e-22 109.8 100 58.0
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.5e-22 109.8 107 55.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.0e-22 109.4 107 54.2
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.0e-22 109.4 107 54.2
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.0e-22 109.4 107 54.2
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 2.0e-22 109.4 110 56.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-22 109.4 93 62.4
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.6e-22 109.0 105 59.0
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 3.3e-22 108.6 88 56.8
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.3e-22 108.6 93 60.2
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 3.3e-22 108.6 93 59.1
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 4.4e-22 108.2 106 58.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 4.4e-22 108.2 91 57.1
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 5.7e-22 107.8 93 61.3
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 5.7e-22 107.8 93 60.2
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 9.7e-22 107.1 93 58.1
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.3e-21 106.7 114 50.9
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.3e-21 106.7 115 49.6
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.7e-21 106.3 88 62.5
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 2.2e-21 105.9 109 50.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 2.8e-21 105.5 108 51.9
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.8e-21 105.5 86 62.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.8e-21 105.5 93 59.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.7e-21 105.1 108 50.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 4.8e-21 104.8 100 57.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 6.3e-21 104.4 88 62.5
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.3e-21 104.4 88 58.0
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 8.3e-21 104.0 101 59.4
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.1e-20 103.6 88 61.4
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-20 102.8 109 54.1
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.3e-20 101.3 87 56.3
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 2.0e-19 99.4 87 59.8
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 2.7e-19 99.0 88 59.1
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 7.7e-19 97.4 111 53.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-18 95.9 87 58.6
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 4.2e-17 91.7 70 65.7
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.7e-16 89.0 88 53.4
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.7e-16 88.2 68 64.7
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.2e-14 83.6 97 46.4
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.5e-14 83.2 64 67.2
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.0e-14 82.8 94 45.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 2.6e-14 82.4 96 45.8
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 5.7e-14 81.3 88 52.3
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.3e-13 80.1 102 42.2
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.7e-13 79.7 64 68.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 5.4e-12 74.7 66 51.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.7e-11 72.4 85 45.9
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.1e-09 67.0 62 64.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.6e-08 63.2 91 37.4
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 6.1e-08 61.2 117 35.9
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.0e-06 56.2 100 33.0
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.0e-06 56.2 57 52.6


User provided reference genes

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