Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 3.4e-276 954.5 525 100.0
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 2.8e-182 642.5 498 70.5
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 7.7e-180 634.4 495 68.9
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.4e-176 623.6 497 67.6
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.5e-170 603.6 498 66.9
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 5.2e-168 595.1 498 64.7
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 1.3e-166 590.5 502 64.7
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.1e-165 585.9 496 63.7
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.2e-164 583.9 496 64.1
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 2.9e-163 579.3 497 64.6
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.0e-160 570.9 496 62.3
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 6.3e-158 561.6 523 61.2
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 8.3e-158 561.2 497 62.4
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.1e-157 560.8 498 64.1
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.4e-157 559.7 497 62.2
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 9.4e-154 547.7 496 62.3
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 3.0e-152 542.7 500 61.8
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 8.8e-152 541.2 498 61.0
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.0e-151 540.0 505 61.0
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 4.4e-151 538.9 498 59.4
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 9.8e-151 537.7 497 60.8
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 2.8e-150 536.2 498 59.2
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 7.0e-149 531.6 496 61.7
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 9.2e-149 531.2 489 60.7
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.7e-147 526.9 508 60.4
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 2.5e-146 523.1 497 60.0
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.3e-146 522.3 496 61.3
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 9.5e-146 521.2 523 56.6
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.6e-145 520.4 499 59.7
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 2.8e-145 519.6 504 57.9
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 2.8e-145 519.6 496 61.3
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 3.6e-145 519.2 556 55.0
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 2.3e-144 516.5 497 59.2
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.2e-143 514.2 496 59.1
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.5e-143 513.8 508 58.5
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 2.2e-142 510.0 494 59.1
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.2e-140 504.2 499 58.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.6e-137 492.7 556 54.3
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.0e-137 491.5 556 54.7
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 1.0e-136 491.1 498 57.0
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.1e-136 489.6 557 54.8
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 7.5e-135 485.0 500 57.4
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.3e-134 484.2 498 56.2
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 2.9e-134 483.0 502 58.2
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 4.1e-133 479.2 502 57.8
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.6e-132 477.2 466 58.4
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 6.0e-132 475.3 515 56.1
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 2.8e-129 466.5 431 60.3
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 5.8e-127 458.8 587 48.4
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 8.3e-126 454.9 502 54.2
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 5.4e-125 452.2 495 54.1
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 7.1e-125 451.8 488 55.9
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 3.0e-123 446.4 502 54.4
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 6.6e-123 445.3 497 54.3
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.3e-122 443.0 501 53.3
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 3.3e-122 443.0 501 53.3
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 3.3e-122 443.0 502 53.8
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 4.3e-122 442.6 503 54.7
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 2.3e-120 436.8 499 53.5
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 4.0e-120 436.0 497 52.9
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.6e-119 433.3 494 53.0
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 3.4e-119 433.0 499 52.3
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 3.4e-119 433.0 426 58.2
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.7e-118 430.6 501 52.7
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 4.9e-118 429.1 446 57.0
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 6.0e-116 422.2 496 52.0
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 7.3e-114 415.2 478 56.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 1.1e-106 391.3 446 52.2
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 4.3e-106 389.4 413 58.1
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 4.8e-105 386.0 537 47.1
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 5.3e-104 382.5 353 60.9
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.3e-102 377.9 498 49.0
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 4.2e-101 372.9 372 60.2
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-98 364.8 421 53.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 2.1e-97 360.5 501 47.5
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 3.4e-95 353.2 503 46.5
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.4e-88 331.3 420 51.4
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 8.2e-81 305.4 257 65.4
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.1e-80 305.1 385 48.6
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 7.4e-74 282.3 323 51.4
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 3.8e-54 216.9 321 45.5
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 2.0e-50 204.5 316 45.3
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 1.3e-41 175.3 233 47.2
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.4e-35 155.2 313 38.7
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 7.8e-31 139.4 165 49.7
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 9.5e-29 132.5 161 52.2
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.0e-26 124.8 211 41.7
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 7.5e-26 122.9 79 81.0
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 5.9e-23 113.2 189 43.9
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.7e-22 111.7 76 77.6
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 8.0e-20 102.8 553 29.3
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.2e-18 99.0 61 75.4
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.4e-18 97.4 53 94.3
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 9.8e-18 95.9 61 73.8
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 9.2e-16 89.4 62 69.4
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 7.3e-13 79.7 286 30.8
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.6e-12 78.6 44 88.6
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.5e-10 72.0 77 58.4
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 1.7e-09 68.6 38 89.5
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 7.1e-08 63.2 59 59.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 7.1e-08 63.2 59 59.3
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.6e-07 62.0 53 56.6
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 1.0e-06 59.3 41 65.9


User provided reference genes

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