Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 3.0e-173 613.2 304 100.0
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.5e-76 292.0 278 53.2
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.5e-76 292.0 278 53.2
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 2.1e-70 271.6 269 53.5
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.4e-69 268.9 228 56.1
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.5e-68 265.4 230 56.1
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 9.8e-68 262.7 263 51.3
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 4.1e-66 257.3 258 50.4
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 6.2e-62 243.4 296 47.0
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 1.2e-60 239.2 287 43.9
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 8.6e-56 223.0 242 45.0
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 1.8e-53 215.3 224 48.7
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 4.4e-52 210.7 239 47.7
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 2.2e-51 208.4 256 44.9
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 4.9e-51 207.2 283 40.6
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 1.4e-50 205.7 260 45.8
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 1.0e-48 199.5 273 41.0
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 2.1e-46 191.8 182 53.8
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 8.1e-46 189.9 262 42.0
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.4e-45 189.1 258 42.6
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 6.9e-45 186.8 252 42.1
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 4.4e-44 184.1 308 35.7
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 4.2e-42 177.6 251 40.2
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 7.1e-42 176.8 275 37.5
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 1.2e-41 176.0 265 37.4
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 1.7e-40 172.2 179 52.5
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 3.3e-39 167.9 260 38.8
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 7.3e-39 166.8 178 44.9
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 1.6e-38 165.6 260 37.3
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 1.1e-37 162.9 234 39.3
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 4.0e-37 161.0 299 34.8
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 6.9e-37 160.2 260 36.9
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 2.7e-33 148.3 290 34.1
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 6.0e-33 147.1 305 35.4
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 6.0e-33 147.1 176 47.7
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 7.9e-33 146.7 281 34.5
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 2.8e-30 138.3 181 42.5
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 9.9e-28 129.8 300 31.7
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 4.9e-27 127.5 217 33.2
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.1e-26 126.3 213 32.9
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 2.4e-26 125.2 213 32.4
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 6.0e-25 120.6 204 36.3
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 1.0e-24 119.8 154 39.6
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 2.3e-24 118.6 194 35.1
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 5.1e-24 117.5 216 35.6
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 1.5e-23 115.9 194 35.1
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 3.4e-20 104.8 252 29.0
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 2.2e-19 102.1 116 47.4
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 3.3e-15 88.2 187 32.1
Lsat_1_v5_gn_5_112121 Lactuca sativa HOM05D008483 ORTHO05D010726 1.6e-09 69.3 75 49.3
Actinidia14742 Actinidia chinensis HOM05D008483 ORTHO05D018225 2.7e-09 68.6 62 58.1
Rhsim13G0154100 Rhododendron simsii HOM05D002890 ORTHO05D009847 3.0e-08 65.1 300 22.7
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 5.1e-08 64.3 183 26.2
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 8.8e-08 63.5 285 22.8
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 8.8e-08 63.5 257 23.0
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 2.5e-07 62.0 267 23.2
AT1G11710 Arabidopsis thaliana HOM05D002890 ORTHO05D009847 7.4e-07 60.5 222 26.1
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 7.4e-07 60.5 246 22.8
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 9.7e-07 60.1 244 24.6
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 9.7e-07 60.1 238 26.1
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 9.7e-07 60.1 167 25.7
CSS0039062 Camellia sinensis var. sinensis HOM05D006556 ORTHO05D008146 2.2e-06 58.9 287 23.0
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 2.2e-06 58.9 262 21.0
Sp5g21370 Schrenkiella parvula HOM05D007291 ORTHO05D009038 2.2e-06 58.9 145 24.8
Carub.0001s1135 Capsella rubella HOM05D002890 ORTHO05D009847 2.8e-06 58.5 243 26.3
FAN03G2556 Fragaria x ananassa HOM05D006556 ORTHO05D008146 2.8e-06 58.5 249 22.9
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 2.8e-06 58.5 260 22.7
SMO352G0069 Selaginella moellendorffii HOM05D005622 ORTHO05D002854 2.8e-06 58.5 176 24.4
SGA_v2.0_scaffold134G34680 Striga asiatica HOM05D007212 ORTHO05D009094 2.8e-06 58.5 165 28.5
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 3.7e-06 58.2 265 24.9
Ciclev10014539m.g Citrus clementina HOM05D002890 ORTHO05D009847 3.7e-06 58.2 217 24.0
Thhalv10007012m.g Eutrema salsugineum HOM05D002890 ORTHO05D009847 4.8e-06 57.8 219 26.5
Thhalv10018418m.g Eutrema salsugineum HOM05D007291 ORTHO05D009038 8.2e-06 57.0 201 25.4


User provided reference genes

Program Settings