Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.3e-88 328.9 177 100.0
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 5.8e-39 164.9 177 54.2
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 9.9e-39 164.1 173 55.5
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.9e-38 162.5 177 55.4
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 3.8e-38 162.2 158 61.4
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 3.8e-38 162.2 173 54.3
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.9e-38 161.8 179 54.7
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.9e-37 159.8 177 53.7
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.6e-36 156.8 173 54.3
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.7e-35 153.3 177 53.7
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.3e-34 149.1 176 50.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.3e-34 148.7 177 52.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.3e-33 147.1 180 53.3
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.1e-33 146.4 173 53.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 2.1e-33 146.4 173 50.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 6.2e-33 144.8 172 52.9
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 8.1e-33 144.4 173 50.3
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.1e-32 142.5 173 51.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 5.3e-32 141.7 175 49.7
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 5.3e-32 141.7 141 61.0
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 1.2e-31 140.6 173 51.4
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-31 140.2 177 50.3
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 3.4e-31 139.0 174 51.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 3.4e-31 139.0 179 52.0
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.4e-31 139.0 174 48.9
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 7.6e-31 137.9 177 50.8
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.3e-30 137.1 177 50.3
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.7e-30 136.7 177 53.1
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.2e-30 136.3 178 52.2
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.2e-30 136.3 177 49.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.9e-30 136.0 146 56.8
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 8.4e-30 134.4 177 49.7
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.1e-29 134.0 174 49.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.4e-29 132.9 173 48.0
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 3.2e-29 132.5 174 51.1
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.2e-29 132.5 179 47.5
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.2e-29 132.1 176 50.0
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 4.2e-29 132.1 176 52.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 5.4e-29 131.7 174 51.7
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 2.1e-28 129.8 151 54.3
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 2.7e-28 129.4 177 46.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 2.7e-28 129.4 110 70.9
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 2.7e-28 129.4 173 48.0
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.6e-28 128.6 171 48.0
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 6.0e-28 128.3 172 48.8
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.0e-27 127.5 177 47.5
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.0e-27 127.5 172 48.3
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.0e-27 127.5 169 49.7
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.3e-27 127.1 174 49.4
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.3e-27 127.1 168 47.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.3e-27 126.3 146 55.5
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 3.0e-27 125.9 176 51.7
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.9e-27 125.6 146 55.5
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.9e-27 125.6 155 55.5
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 5.1e-27 125.2 174 51.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 6.7e-27 124.8 177 46.9
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 8.7e-27 124.4 146 54.8
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.5e-26 123.6 146 54.8
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 4.3e-26 122.1 139 54.0
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 5.6e-26 121.7 172 45.9
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 5.6e-26 121.7 176 47.7
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.3e-25 120.6 147 55.1
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.3e-25 120.6 110 70.0
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.3e-25 120.6 173 46.8
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.1e-25 119.8 173 49.1
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 6.2e-25 118.2 177 46.3
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.1e-25 117.9 130 55.4
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.4e-24 117.1 177 44.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.4e-24 117.1 177 44.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.4e-24 117.1 177 44.6
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.4e-24 117.1 173 46.2
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.8e-24 116.7 174 46.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.8e-24 116.7 173 47.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.4e-24 116.3 95 73.7
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.1e-24 115.9 173 45.1
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 9.0e-24 114.4 145 51.0
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.2e-23 114.0 161 49.7
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.2e-23 114.0 146 50.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.2e-23 114.0 179 46.9
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.5e-23 113.6 161 49.1
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.5e-23 113.6 168 46.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.5e-23 112.1 122 54.9
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 4.5e-23 112.1 98 67.3
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 4.5e-23 112.1 175 45.7
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.5e-23 112.1 177 45.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.9e-22 109.4 173 44.5
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.9e-22 108.6 173 42.2
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.2e-20 104.0 172 44.8
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.0e-19 100.9 82 74.4
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.0e-19 100.9 173 43.4
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.3e-19 99.8 78 73.1
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 6.7e-19 98.2 175 45.1
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 9.6e-18 94.4 84 72.6
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 9.6e-18 94.4 115 60.9
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 4.8e-17 92.0 77 79.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.4e-16 90.5 113 54.9
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.4e-16 90.5 169 42.0
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.8e-16 90.1 172 39.5
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 7.6e-15 84.7 112 50.9
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 5.0e-14 82.0 82 63.4
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 6.5e-14 81.6 85 50.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.5e-13 79.7 83 61.4
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 7.2e-13 78.2 88 53.4
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.1e-08 62.8 125 32.0


User provided reference genes

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