Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 3.1e-249 864.8 468 100.0
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 5.3e-172 608.2 371 79.0
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.7e-167 593.2 442 70.6
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 3.0e-167 592.4 476 66.2
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 3.9e-167 592.0 478 64.4
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 6.6e-167 591.3 451 67.2
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 6.6e-167 591.3 451 67.4
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 4.3e-166 588.6 371 77.1
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 7.3e-166 587.8 371 77.1
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 4.8e-165 585.1 371 77.1
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 1.4e-164 583.6 369 74.5
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.4e-164 583.6 371 76.5
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 5.3e-164 581.6 369 76.2
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 3.4e-163 578.9 371 75.2
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 7.6e-163 577.8 359 77.4
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 3.8e-162 575.5 372 74.2
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 4.9e-162 575.1 371 74.1
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 1.1e-161 573.9 475 63.8
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 4.2e-161 572.0 371 73.9
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.1e-160 569.7 475 62.7
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 3.5e-160 568.9 371 73.9
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 6.0e-160 568.2 371 74.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.0e-159 567.4 369 73.4
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.0e-159 567.4 369 73.4
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.3e-159 567.0 371 73.3
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 5.1e-159 565.1 369 73.4
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 8.7e-159 564.3 467 61.2
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 8.7e-159 564.3 373 71.6
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.1e-158 563.9 370 74.3
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.1e-158 563.9 369 72.9
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 1.9e-158 563.1 369 74.3
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.9e-158 563.1 371 72.5
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 2.5e-158 562.8 373 71.3
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.3e-158 562.0 369 74.3
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 4.3e-158 562.0 371 73.3
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 5.6e-158 561.6 473 61.9
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.1e-157 559.7 369 73.7
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 6.2e-157 558.1 441 64.2
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 8.1e-157 557.8 363 74.4
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.0e-156 555.4 385 70.1
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.0e-156 555.4 369 73.2
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 9.0e-156 554.3 371 72.8
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 2.6e-155 552.7 365 72.1
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.0e-154 550.8 369 71.8
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.0e-154 550.8 369 72.6
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 2.2e-154 549.7 369 71.0
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 2.9e-154 549.3 371 70.1
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 6.4e-154 548.1 368 70.4
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 6.4e-154 548.1 368 70.1
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 6.4e-154 548.1 371 72.2
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.1e-153 547.4 341 78.6
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 1.1e-153 547.4 371 71.4
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 1.4e-153 547.0 371 71.4
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.4e-153 547.0 411 66.4
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.9e-153 546.6 369 71.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 3.2e-153 545.8 371 70.9
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 5.5e-153 545.0 371 70.6
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 1.6e-152 543.5 371 70.9
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 2.7e-152 542.7 365 72.9
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 3.5e-152 542.3 371 71.2
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 3.5e-152 542.3 371 71.2
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 3.9e-151 538.9 371 69.5
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.1e-150 537.3 371 69.3
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.1e-150 537.3 371 70.9
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.1e-150 537.3 370 70.3
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.5e-150 537.0 371 69.3
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.5e-150 537.0 371 69.3
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.5e-150 537.0 371 69.0
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 1.9e-150 536.6 371 68.5
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 2.5e-150 536.2 371 67.9
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 3.3e-150 535.8 371 68.5
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 5.7e-150 535.0 371 69.0
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 5.7e-150 535.0 371 69.0
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 9.6e-150 534.3 371 68.5
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 6.2e-149 531.6 371 69.3
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.1e-148 530.8 371 67.9
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.1e-148 530.8 361 72.0
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.1e-148 530.8 371 70.1
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 1.8e-148 530.0 371 67.7
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 1.8e-148 530.0 371 67.7
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.4e-148 529.6 463 59.2
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.1e-148 529.3 371 67.7
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 6.9e-148 528.1 371 68.2
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 9.0e-148 527.7 369 68.6
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.3e-146 523.9 369 67.8
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 4.9e-146 521.9 368 68.5
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 6.5e-146 521.5 387 66.7
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 8.4e-146 521.2 369 67.8
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.1e-145 520.8 369 67.8
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.4e-145 520.4 365 67.1
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 3.2e-145 519.2 369 67.8
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 3.2e-145 519.2 369 67.8
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 5.5e-145 518.5 508 58.3
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.2e-144 517.3 370 65.4
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 2.3e-143 513.1 365 66.8
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 3.0e-143 512.7 594 50.2
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 1.5e-142 510.4 366 66.4
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 1.9e-142 510.0 381 68.0
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 7.4e-142 508.1 337 73.6
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.3e-141 507.3 492 54.5
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 2.2e-141 506.5 371 67.1
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 8.2e-141 504.6 341 72.4
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 1.4e-140 503.8 391 64.7
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 5.3e-140 501.9 326 73.0
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 9.0e-140 501.1 371 68.7
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.0e-139 500.0 347 68.3
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 2.0e-139 500.0 360 69.2
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 6.5e-138 495.0 371 65.2
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.2e-136 490.7 299 78.6
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.8e-135 486.9 347 67.7
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.8e-135 486.9 347 67.7
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.5e-134 483.0 371 66.3
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 4.3e-134 482.3 371 67.1
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 1.3e-133 480.7 331 68.3
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.8e-127 460.3 351 63.2
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 5.1e-127 458.8 346 67.1
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.6e-126 456.4 304 71.1
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.7e-125 453.8 304 71.1
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 4.8e-125 452.2 388 59.5
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 5.3e-124 448.7 369 57.2
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 3.5e-123 446.0 372 60.2
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 1.2e-120 437.6 360 58.1
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 3.0e-119 433.0 304 69.4
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.4e-116 424.1 326 63.8
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 9.1e-116 421.4 370 52.7
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 3.8e-114 416.0 388 55.9
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 7.5e-110 401.7 246 76.8
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 9.8e-110 401.4 352 63.4
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.3e-106 391.0 372 53.5
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 3.2e-105 386.3 378 51.3
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 1.3e-101 374.4 255 71.8
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 3.8e-98 362.8 217 77.9
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.8e-98 362.8 260 67.7
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 5.0e-90 335.9 214 74.8
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 8.3e-77 292.0 366 42.3
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 2.5e-65 253.8 291 45.0
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 8.1e-64 248.8 305 50.8
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 4.9e-61 239.6 282 45.4
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.8e-48 197.2 176 59.1
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 1.1e-36 158.7 103 71.8
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.3e-34 151.0 97 71.1
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 6.3e-32 142.9 82 81.7
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 1.3e-24 118.6 77 71.4
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 9.4e-20 102.4 93 55.9
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 3.0e-18 97.4 108 50.0
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 9.7e-17 92.4 95 51.6
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.3e-16 92.0 62 71.0
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 6.5e-13 79.7 55 65.5
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.1e-12 79.0 56 64.3
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.1e-12 79.0 56 64.3
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.1e-12 79.0 56 64.3
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.4e-12 78.6 61 60.7
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.2e-12 77.4 56 62.5
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 1.3e-08 65.5 42 69.0
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.1e-07 62.4 32 81.2
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 5.9e-06 56.6 52 55.8


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