Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 4.6e-91 337.8 162 100.0
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-62 243.4 130 90.8
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-37 158.7 161 46.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 4.2e-36 155.2 160 41.9
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-33 144.1 159 45.3
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 6.3e-32 141.4 160 39.4
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 4.1e-31 138.7 160 41.2
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-29 132.5 159 38.4
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-29 131.7 160 41.2
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-29 131.0 161 39.8
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-28 128.6 159 37.1
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-26 122.9 160 38.1
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-26 122.1 157 39.5
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-24 115.5 163 35.0
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-24 114.8 154 39.6
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-23 112.1 163 34.4
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-23 112.1 163 34.4
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 5.3e-23 111.7 146 34.2
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-23 111.7 159 37.1
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-22 109.8 161 34.2
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 1.7e-21 106.7 121 40.5
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-21 104.8 124 36.3
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-19 100.5 123 38.2
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 6.1e-19 98.2 105 44.8
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 2.3e-18 96.3 95 45.3
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-18 96.3 172 29.1
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 5.2e-18 95.1 155 28.4
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 8.8e-18 94.4 161 29.8
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-17 93.6 98 42.9
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 1.5e-17 93.6 98 42.9
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-17 92.4 124 36.3
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 5.7e-17 91.7 155 31.0
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-17 91.7 100 43.0
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 3.7e-16 89.0 88 46.6
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 1.1e-15 87.4 92 42.4
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-15 85.5 98 35.7
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 9.1e-15 84.3 125 33.6
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-14 84.0 110 33.6
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 2.9e-13 79.3 152 27.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.9e-13 79.3 154 27.9
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 5.0e-13 78.6 155 27.1
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 6.5e-13 78.2 152 28.3
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-12 76.6 152 27.0
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.9e-12 76.6 152 27.0
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.5e-12 76.3 166 27.7
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 4.2e-12 75.5 152 27.0
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 7.2e-12 74.7 99 36.4
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 2.1e-11 73.2 155 28.4
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-11 72.8 100 34.0
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 3.6e-11 72.4 161 24.8
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.1e-11 71.6 161 24.2
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.1e-11 71.6 161 24.2
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 8.0e-11 71.2 153 25.5
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 8.0e-11 71.2 156 27.6
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.0e-10 70.9 161 23.6
Cc07_g03400 Coffea canephora HOM05D006612 ORTHO05D009014 1.8e-10 70.1 151 29.8
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-10 70.1 155 27.7
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-10 68.9 98 33.7
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 5.2e-10 68.6 161 23.6
SGA_v2.0_scaffold116G32264 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-10 68.6 103 37.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 8.8e-10 67.8 161 27.3
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.2e-09 67.4 161 23.0
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 1.5e-09 67.0 56 44.6
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 1.5e-09 67.0 56 44.6
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 1.5e-09 67.0 56 44.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-09 66.6 95 31.6
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 2.0e-09 66.6 56 42.9
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 3.4e-09 65.9 127 27.6
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 7.5e-09 64.7 151 27.8
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 9.8e-09 64.3 164 24.4
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 9.8e-09 64.3 151 22.5
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-08 63.9 180 24.4
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.3e-08 61.2 161 26.1
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-07 60.1 163 25.8
Cc10_g00450 Coffea canephora HOM05D004506 ORTHO05D005894 1.8e-07 60.1 106 35.8
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 2.4e-07 59.7 148 24.3
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 4.1e-07 58.9 155 22.6
Atru.chr11.411 Acer truncatum HOM05D006612 ORTHO05D010384 9.2e-07 57.8 80 28.8
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-06 57.4 165 23.0
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 1.6e-06 57.0 166 24.7
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-06 57.0 99 30.3
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-06 56.2 98 31.6
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 5.9e-06 55.1 150 25.3
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.7e-06 54.7 108 29.6


User provided reference genes

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