Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 1.4e-70 270.0 194 100.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.5e-13 79.3 98 43.9
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.5e-13 79.3 98 43.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 4.3e-11 72.4 91 44.0
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.6e-10 69.3 92 41.3
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 4.8e-10 68.9 93 37.6
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.8e-09 67.0 92 39.1
Nitab4.5_0000804g0140 Nicotiana tabacum HOM05D023668 ORTHO05D009793 2.6e-08 63.2 90 42.2
Nitab4.5_0002539g0010 Nicotiana tabacum HOM05D023668 ORTHO05D009793 2.9e-07 59.7 90 42.2
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.8e-07 59.3 101 37.6
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 8.4e-07 58.2 92 39.1
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 8.4e-07 58.2 94 41.5
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.1e-06 57.8 92 37.0
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.9e-06 57.0 94 37.2
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 2.4e-06 56.6 90 37.8
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 2.4e-06 56.6 89 40.4
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 3.2e-06 56.2 92 39.1
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 3.2e-06 56.2 99 36.4
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 4.2e-06 55.8 90 40.0
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 4.2e-06 55.8 91 39.6
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 4.2e-06 55.8 92 37.0
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 5.4e-06 55.5 91 38.5


User provided reference genes

Program Settings