Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 8.3e-208 726.9 384 100.0
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 8.7e-157 557.4 386 79.5
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.1e-156 557.0 384 77.1
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 7.4e-156 554.3 378 79.4
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 1.5e-153 546.6 385 76.1
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 4.5e-153 545.0 379 78.1
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 1.1e-151 540.4 385 75.1
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 5.5e-151 538.1 379 76.3
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 4.6e-150 535.0 382 74.1
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 6.1e-150 534.6 382 72.5
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 5.1e-149 531.6 390 74.6
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 9.7e-148 527.3 381 73.5
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 2.2e-147 526.2 382 73.3
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 3.7e-147 525.4 380 74.2
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 4.8e-147 525.0 395 71.9
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 1.4e-146 523.5 389 73.0
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 3.1e-146 522.3 388 72.7
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 4.1e-146 521.9 379 74.4
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 1.2e-145 520.4 384 72.1
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.2e-145 520.4 362 76.5
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 2.6e-145 519.2 378 73.5
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 3.4e-145 518.8 387 74.2
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.0e-144 517.3 377 73.5
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 2.9e-144 515.8 379 74.1
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 3.8e-144 515.4 348 79.0
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 3.8e-144 515.4 384 73.4
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 6.5e-144 514.6 362 75.1
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 1.1e-143 513.8 356 75.0
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 1.4e-143 513.5 316 82.3
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 3.2e-143 512.3 384 72.9
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 5.5e-143 511.5 326 80.1
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 9.4e-143 510.8 329 80.9
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 1.6e-142 510.0 320 81.6
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 2.1e-142 509.6 379 73.6
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 2.7e-142 509.2 444 65.3
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 3.6e-142 508.8 385 71.7
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 3.6e-142 508.8 304 83.9
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 3.6e-142 508.8 371 73.3
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.4e-141 506.9 365 75.1
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 2.3e-141 506.1 385 71.2
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 3.0e-141 505.8 377 72.4
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 5.1e-141 505.0 382 71.2
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 5.1e-141 505.0 382 71.2
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 5.1e-141 505.0 376 72.3
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 5.1e-141 505.0 384 70.1
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.1e-140 503.8 377 72.1
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 1.5e-140 503.4 383 70.8
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 2.5e-140 502.7 385 71.2
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 5.7e-140 501.5 294 84.4
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 1.3e-139 500.4 388 70.1
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 2.2e-139 499.6 342 76.9
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 2.2e-139 499.6 346 76.6
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 2.8e-139 499.2 375 71.7
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 2.8e-139 499.2 346 76.0
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 6.3e-139 498.0 381 69.3
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.1e-138 495.7 381 71.4
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 3.1e-138 495.7 394 69.3
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 4.1e-138 495.4 368 72.8
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 5.3e-138 495.0 385 70.4
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 6.9e-138 494.6 380 70.5
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 9.1e-138 494.2 368 72.6
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 1.5e-137 493.4 346 75.1
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 2.0e-137 493.0 410 65.1
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 7.7e-137 491.1 302 81.1
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 7.7e-137 491.1 379 70.7
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 1.3e-136 490.3 318 77.4
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.8e-136 488.8 326 75.5
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 5.0e-136 488.4 350 74.6
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 1.1e-135 487.3 380 69.2
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 1.1e-135 487.3 321 76.9
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.2e-134 483.8 384 67.4
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 1.2e-134 483.8 305 80.3
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.6e-134 483.4 377 70.3
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 6.1e-134 481.5 315 76.2
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 6.1e-134 481.5 348 73.6
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 6.1e-134 481.5 327 75.5
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 1.4e-133 480.3 326 74.2
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 1.4e-133 480.3 326 74.2
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 1.8e-133 479.9 379 68.3
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 8.8e-133 477.6 326 73.9
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 1.1e-132 477.2 326 73.9
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 3.3e-132 475.7 329 74.2
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 3.3e-132 475.7 329 72.0
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 4.4e-132 475.3 346 71.1
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 5.7e-132 474.9 328 73.5
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 9.7e-132 474.2 324 73.1
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 9.7e-132 474.2 328 73.5
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.3e-131 473.8 359 69.9
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 2.2e-131 473.0 328 73.2
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 2.2e-131 473.0 328 73.2
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 2.8e-131 472.6 324 73.1
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 3.7e-131 472.2 326 74.2
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 4.8e-131 471.9 440 59.8
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 8.2e-131 471.1 349 69.1
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 1.1e-130 470.7 328 72.9
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 5.3e-130 468.4 342 70.8
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 5.9e-129 464.9 286 79.4
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 6.5e-128 461.5 339 70.8
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.1e-127 460.7 282 79.1
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 3.2e-127 459.1 342 68.7
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 4.2e-127 458.8 316 72.8
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 5.5e-127 458.4 334 74.6
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 7.2e-127 458.0 316 72.8
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.2e-126 457.2 326 71.8
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.8e-125 453.4 276 80.1
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 6.7e-125 451.4 389 61.2
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 6.7e-125 451.4 276 79.0
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 1.1e-124 450.7 397 59.7
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 2.6e-124 449.5 276 78.6
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 4.4e-124 448.7 278 78.4
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.8e-123 446.0 393 60.6
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 8.2e-123 444.5 393 60.8
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 8.2e-123 444.5 277 78.0
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 8.2e-123 444.5 393 60.8
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 8.2e-123 444.5 277 78.0
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 1.8e-122 443.4 381 62.5
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 3.1e-122 442.6 358 65.1
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 5.3e-122 441.8 386 60.6
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 5.3e-122 441.8 389 60.9
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 1.2e-121 440.7 347 68.3
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.0e-117 427.6 375 62.9
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 1.2e-116 424.1 303 75.2
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 6.1e-110 401.7 314 71.3
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 3.0e-109 399.4 328 64.6
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.3e-107 394.0 352 59.7
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 2.8e-107 392.9 282 73.4
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.3e-104 383.3 216 88.4
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 8.3e-99 364.8 289 70.9
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 2.0e-97 360.1 286 69.9
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 4.0e-93 345.9 190 92.1
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 5.0e-88 328.9 328 53.7
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 1.9e-87 327.0 273 57.9
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 2.5e-87 326.6 282 65.6
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.2e-86 324.3 284 66.2
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.8e-86 323.2 284 66.2
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.1e-85 321.2 273 58.2
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.3e-80 303.5 282 62.8
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 5.2e-77 292.4 268 65.7
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 4.7e-70 269.2 255 51.4
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 4.9e-67 259.2 242 61.2
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 1.1e-61 241.5 179 68.2
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-61 240.7 179 68.7
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 4.0e-61 239.6 162 77.8
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 2.6e-60 236.9 179 67.6
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-58 230.3 135 83.0
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 2.9e-43 180.3 126 72.2
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 9.3e-42 175.3 116 73.3
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 1.2e-41 174.9 103 80.6
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 1.6e-38 164.5 157 53.5
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 7.2e-34 149.1 131 62.6
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 8.7e-32 142.1 77 83.1
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 5.7e-31 139.4 77 80.5
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 2.2e-30 137.5 77 83.1
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.1e-29 135.2 98 70.4
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 4.2e-26 123.2 114 46.5
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 2.1e-25 120.9 62 83.9
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 1.5e-23 114.8 90 64.4
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 3.3e-23 113.6 102 52.9
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 8.2e-22 109.0 74 74.3
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 1.4e-21 108.2 69 79.7
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 1.9e-18 97.8 57 87.7
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 1.2e-17 95.1 141 40.4
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 1.2e-17 95.1 55 83.6
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.0e-16 92.0 57 84.2
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 4.4e-15 86.7 53 75.5
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.8e-13 81.3 55 74.5
A01p32880 Brassica napus HOM05D004120 ORTHO05D023811 9.7e-07 58.9 28 96.4
A06p35780 Brassica napus HOM05D004120 ORTHO05D023811 9.7e-07 58.9 28 96.4
BraA01t03409Z Brassica rapa HOM05D004120 ORTHO05D023811 9.7e-07 58.9 28 96.4
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.3e-06 58.5 36 69.4
BraA06t26504Z Brassica rapa HOM05D004120 ORTHO05D033838 8.2e-06 55.8 29 86.2


User provided reference genes

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