Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 1.1e-234 816.2 421 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 1.6e-66 257.7 407 41.5
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 2.2e-60 237.3 412 40.3
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 4.1e-51 206.5 404 37.9
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.5e-48 198.0 407 37.8
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 5.6e-48 196.1 389 38.6
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 5.2e-46 189.5 408 37.0
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.5e-45 188.0 390 37.7
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.9e-44 183.7 401 37.4
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.9e-43 181.0 407 37.3
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 7.8e-42 175.6 408 36.5
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 8.7e-41 172.2 396 37.9
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 8.7e-41 172.2 446 35.2
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.1e-40 171.8 442 35.1
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 2.5e-40 170.6 396 36.9
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 3.3e-40 170.2 417 36.2
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 4.3e-40 169.9 415 34.7
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 6.2e-39 166.0 358 37.7
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.4e-38 164.9 356 36.5
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-38 164.5 412 33.7
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.0e-38 163.3 404 32.9
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 4.0e-38 163.3 412 35.7
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 9.0e-38 162.2 409 33.5
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 1.2e-37 161.8 443 34.1
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 2.0e-37 161.0 407 36.4
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 2.0e-37 161.0 407 33.7
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 3.4e-37 160.2 390 36.9
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 5.8e-37 159.5 373 35.7
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 7.6e-37 159.1 371 36.1
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 9.9e-37 158.7 419 36.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-36 158.3 413 32.9
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.3e-36 158.3 391 35.5
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.4e-36 155.6 409 34.5
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 8.4e-36 155.6 411 33.6
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 1.4e-35 154.8 399 35.8
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.2e-35 153.3 397 35.5
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 7.1e-35 152.5 339 36.9
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 7.1e-35 152.5 339 36.9
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.7e-34 150.6 396 35.4
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 3.5e-34 150.2 398 35.4
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.9e-33 146.7 446 30.7
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.1e-33 146.4 412 33.5
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.3e-31 141.7 365 34.5
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.6e-31 141.4 390 34.9
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 2.1e-31 141.0 348 38.2
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 2.1e-31 141.0 409 35.7
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 4.8e-31 139.8 407 34.6
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 8.1e-31 139.0 444 34.0
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 8.1e-31 139.0 403 34.2
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 1.1e-30 138.7 403 33.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 3.1e-30 137.1 402 32.6
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.2e-29 135.2 420 33.8
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.5e-29 134.8 395 33.7
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.0e-29 134.4 346 35.5
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 7.6e-29 132.5 162 51.9
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.3e-28 131.7 261 39.5
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.3e-28 131.7 372 34.7
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.7e-28 131.3 408 33.8
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 8.4e-28 129.0 403 32.3
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 1.1e-27 128.6 233 39.5
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.4e-27 128.3 355 34.9
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.9e-27 127.9 387 32.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 3.2e-27 127.1 354 34.7
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 4.2e-27 126.7 382 32.2
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 4.6e-26 123.2 353 34.6
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.3e-25 121.7 422 32.0
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 3.9e-25 120.2 418 31.1
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 1.1e-24 118.6 309 34.0
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 1.5e-24 118.2 318 32.1
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 1.9e-24 117.9 375 35.2
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 5.6e-24 116.3 164 45.1
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 1.3e-23 115.2 359 29.8
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 2.1e-23 114.4 389 31.6
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 3.7e-23 113.6 404 30.9
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.8e-22 111.3 390 31.8
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 1.8e-22 111.3 222 34.7
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 3.1e-22 110.5 166 47.0
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 6.9e-22 109.4 385 31.2
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 1.2e-21 108.6 407 29.2
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.5e-21 108.2 263 36.1
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 2.6e-21 107.5 238 37.0
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 3.4e-21 107.1 256 37.5
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 5.8e-21 106.3 394 32.0
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 9.9e-21 105.5 112 58.0
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.7e-20 104.8 417 30.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.7e-20 104.8 234 33.3
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 2.2e-20 104.4 379 29.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.4e-19 101.7 414 28.7
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.5e-19 100.9 387 30.5
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 3.2e-19 100.5 407 30.5
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 4.2e-19 100.1 365 29.3
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 7.1e-19 99.4 390 31.3
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.1e-18 97.8 114 53.5
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.3e-17 94.4 186 41.4
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 3.0e-17 94.0 203 36.9
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 5.1e-17 93.2 337 27.9
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 6.7e-17 92.8 423 29.1
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 4.3e-16 90.1 137 41.6
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 9.6e-16 89.0 121 47.9
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 4.8e-15 86.7 377 27.3
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 4.8e-15 86.7 89 57.3
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 8.2e-15 85.9 101 50.5
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.1e-14 85.5 316 28.5
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 3.1e-14 84.0 82 61.0
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 3.4e-13 80.5 87 56.3
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.5e-13 80.1 352 29.8
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 5.8e-13 79.7 187 36.9
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 7.1e-11 72.8 324 28.1
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 2.1e-10 71.2 184 35.9
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 2.1e-10 71.2 143 35.7
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 2.1e-10 71.2 143 35.0
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 2.7e-10 70.9 144 37.5
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 3.5e-10 70.5 126 44.4
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 7.9e-10 69.3 69 60.9
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.3e-09 68.6 189 36.5
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.5e-08 65.1 371 25.9
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 2.5e-08 64.3 310 26.8
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 5.7e-08 63.2 368 25.8
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 9.7e-08 62.4 343 27.1
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.6e-07 61.6 106 42.5
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 8.2e-07 59.3 82 50.0


User provided reference genes

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