Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.3e-177 624.8 289 100.0
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.4e-129 465.3 289 74.4
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 5.4e-127 458.0 281 74.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.6e-126 456.4 288 73.3
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.5e-126 455.3 286 73.1
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.5e-124 449.9 288 72.2
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.9e-124 449.5 288 70.5
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.9e-124 449.5 288 72.2
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 3.6e-123 445.3 288 70.5
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 4.7e-123 444.9 288 71.2
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 1.4e-122 443.4 317 65.9
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 9.9e-121 437.2 289 68.2
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.3e-120 436.8 289 67.8
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 1.7e-120 436.4 291 68.7
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 2.1e-118 429.5 287 68.6
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.7e-117 426.4 291 67.4
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 9.6e-116 420.6 291 66.3
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 9.6e-116 420.6 291 66.3
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.6e-115 419.9 288 67.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 2.8e-115 419.1 283 67.1
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 4.8e-115 418.3 291 65.6
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.1e-114 417.2 291 65.6
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 2.4e-114 416.0 289 66.8
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 5.3e-114 414.8 289 66.4
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 1.2e-113 413.7 320 61.9
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 3.4e-113 412.1 288 66.3
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 5.8e-113 411.4 288 66.0
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 5.8e-113 411.4 303 64.4
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 9.9e-113 410.6 289 65.7
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.1e-111 407.1 290 65.5
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 7.1e-111 404.4 289 63.0
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 9.3e-111 404.1 289 63.7
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 9.3e-111 404.1 293 64.5
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.1e-110 402.9 288 64.6
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 3.5e-110 402.1 289 64.4
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 4.6e-110 401.7 289 64.4
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.0e-110 401.4 288 64.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.8e-109 399.8 290 65.2
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.8e-109 399.8 320 60.9
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.3e-109 399.4 285 65.3
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 3.9e-109 398.7 288 63.5
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 6.7e-109 397.9 291 64.6
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 8.7e-109 397.5 291 61.9
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 8.7e-109 397.5 289 63.3
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 4.3e-108 395.2 289 64.0
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 7.4e-108 394.4 290 64.8
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 7.4e-108 394.4 288 62.8
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 9.6e-108 394.0 289 64.4
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.6e-107 393.3 288 62.2
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.8e-107 392.5 288 61.8
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 3.7e-107 392.1 288 63.2
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 6.2e-107 391.3 288 61.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 6.2e-107 391.3 288 60.4
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.1e-106 390.6 286 64.7
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.4e-106 390.2 288 62.5
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.8e-106 389.8 290 63.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.8e-106 389.8 290 64.5
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 3.1e-106 389.0 288 61.5
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 4.0e-106 388.7 290 64.1
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.0e-106 388.7 285 63.2
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 9.0e-106 387.5 288 62.2
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 9.0e-106 387.5 280 62.9
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 1.2e-105 387.1 289 62.3
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.0e-105 386.3 285 62.1
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.5e-105 385.2 290 63.8
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 7.6e-105 384.4 291 62.2
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.9e-104 381.7 255 69.0
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.1e-103 380.6 288 61.8
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 4.2e-103 378.6 288 61.5
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 4.2e-103 378.6 404 48.8
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 1.2e-102 377.1 292 61.3
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.6e-102 376.7 294 61.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.5e-102 375.6 315 59.0
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 2.5e-100 369.4 288 60.1
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 3.7e-99 365.5 278 61.5
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 3.1e-98 362.5 288 56.6
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 4.0e-98 362.1 292 59.6
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 4.0e-98 362.1 289 58.1
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.2e-97 360.5 288 57.3
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 2.0e-97 359.8 286 58.4
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 4.5e-97 358.6 291 57.4
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.0e-96 357.5 288 56.9
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.7e-96 356.7 288 57.3
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 2.2e-96 356.3 288 56.6
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 8.4e-96 354.4 288 56.2
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 8.4e-96 354.4 288 56.2
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 1.4e-95 353.6 311 55.6
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 9.3e-95 350.9 288 56.9
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.3e-93 347.1 288 55.2
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 8.7e-93 344.4 427 44.0
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.5e-92 343.6 285 58.2
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.8e-91 339.3 285 55.1
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.4e-90 337.0 279 55.6
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-89 333.6 288 55.9
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.3e-84 315.8 288 51.7
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.2e-81 307.4 290 54.1
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 5.0e-80 302.0 288 51.0
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.4e-79 300.4 288 51.0
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 4.4e-76 288.9 213 63.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-72 277.3 287 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 2.7e-70 269.6 295 43.4
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 2.9e-64 249.6 180 64.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.1e-62 241.9 296 40.9
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.3e-51 205.3 288 39.9
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 5.4e-50 202.2 149 61.7
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.5e-47 194.1 249 39.0
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 4.3e-39 166.0 106 71.7
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 3.5e-33 146.4 106 60.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 4.7e-30 136.0 86 62.8
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 2.1e-06 57.4 79 40.5
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 8.1e-06 55.5 70 47.1


User provided reference genes

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