Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.5e-261 905.6 430 100.0
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 7.6e-202 707.2 429 76.2
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.3e-198 696.4 427 74.2
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.4e-195 685.6 427 74.0
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.4e-195 685.6 427 74.0
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.0e-194 682.6 429 73.7
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.0e-194 682.6 427 72.6
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 6.5e-193 677.6 429 71.8
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.4e-192 676.4 426 73.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 1.4e-192 676.4 428 73.6
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.2e-192 675.2 430 73.5
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 3.2e-192 675.2 427 72.6
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 7.2e-192 674.1 427 72.8
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 1.2e-191 673.3 427 72.4
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 2.1e-191 672.5 429 72.7
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.7e-191 672.2 429 73.0
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.8e-190 669.5 432 72.5
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.8e-190 669.5 428 71.7
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 8.8e-190 667.2 424 72.4
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 2.0e-189 666.0 431 70.8
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.3e-189 665.2 426 70.9
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 5.7e-189 664.5 424 71.2
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 7.4e-189 664.1 425 71.5
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.3e-188 663.3 428 71.7
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.7e-188 662.9 424 72.2
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.1e-187 660.2 426 71.1
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.1e-187 660.2 426 72.1
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.4e-187 659.1 427 70.7
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 3.1e-187 658.7 429 71.3
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 1.5e-186 656.4 425 71.3
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.0e-186 656.0 424 72.4
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 2.6e-186 655.6 430 70.9
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 3.4e-186 655.2 420 72.1
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 3.4e-186 655.2 424 70.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 4.5e-186 654.8 429 71.8
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 4.5e-186 654.8 431 70.5
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 4.5e-186 654.8 430 69.8
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.5e-186 654.8 429 70.9
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 1.0e-185 653.7 425 70.4
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.3e-185 653.3 426 71.6
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.2e-185 652.5 426 70.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.9e-185 652.1 428 70.6
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.5e-185 650.6 422 69.7
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 8.5e-185 650.6 428 69.6
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-184 650.2 426 71.4
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.4e-184 649.8 422 69.7
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.2e-184 648.3 422 69.4
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 5.5e-184 647.9 429 69.2
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 9.4e-184 647.1 429 69.7
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 9.4e-184 647.1 428 70.6
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.2e-183 646.7 422 69.4
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.6e-183 646.4 427 70.0
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.7e-183 645.6 422 69.2
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.7e-183 645.6 422 69.2
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 6.1e-183 644.4 436 69.3
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 6.1e-183 644.4 436 69.3
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 7.9e-183 644.0 431 70.3
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 7.9e-183 644.0 426 71.8
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.0e-182 643.7 424 69.3
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.0e-182 643.7 419 72.1
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 3.9e-182 641.7 426 70.4
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 3.3e-181 638.6 420 70.0
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 3.3e-181 638.6 430 68.6
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.4e-181 638.3 424 70.3
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 9.7e-181 637.1 432 68.8
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.3e-180 636.7 413 70.7
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.3e-180 636.7 420 69.8
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 4.8e-180 634.8 421 67.9
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 8.2e-180 634.0 436 68.8
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 2.6e-178 629.0 426 68.3
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 7.7e-178 627.5 427 69.3
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.3e-177 626.7 425 68.2
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.2e-177 625.9 424 68.6
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.9e-176 622.9 416 68.3
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 2.5e-176 622.5 371 76.0
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 5.5e-176 621.3 430 67.4
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 7.2e-176 620.9 345 79.1
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 2.1e-175 619.4 424 67.7
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 6.7e-174 614.4 355 76.3
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.5e-173 613.2 424 67.0
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 7.4e-173 610.9 428 66.6
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.3e-172 610.1 431 67.1
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.4e-171 605.9 426 64.8
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.4e-171 605.9 426 68.1
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 5.3e-171 604.7 339 78.2
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 7.0e-171 604.4 427 65.8
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.0e-170 602.8 338 77.5
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 2.6e-170 602.4 422 64.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 4.5e-170 601.7 424 64.9
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 1.7e-169 599.7 424 66.5
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.8e-169 598.6 424 64.4
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 6.5e-169 597.8 419 64.4
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 2.5e-168 595.9 431 64.3
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 7.2e-168 594.3 358 74.3
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.2e-167 593.6 422 65.4
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.2e-167 593.6 420 64.0
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 4.7e-167 591.7 426 63.8
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 4.7e-167 591.7 426 63.8
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 4.0e-166 588.6 423 63.8
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 1.2e-165 587.0 423 63.6
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 1.2e-165 587.0 423 63.6
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 5.7e-165 584.7 353 72.2
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.8e-164 581.6 420 64.8
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 4.8e-164 581.6 355 70.7
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.1e-163 578.6 403 67.2
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 7.0e-163 577.8 426 62.9
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 2.0e-162 576.2 358 71.2
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.9e-160 569.7 358 69.8
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.3e-158 562.8 379 66.8
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 6.8e-158 561.2 427 63.5
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.4e-157 558.5 427 63.0
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 5.0e-153 545.0 361 67.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 5.9e-146 521.5 281 79.4
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 5.8e-141 505.0 363 62.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 5.4e-139 498.4 286 75.5
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 6.6e-137 491.5 364 60.7
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 7.3e-136 488.0 351 61.8
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.2e-130 470.7 356 59.8
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.1e-123 447.6 322 66.8
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 7.8e-106 388.3 209 79.4
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.9e-102 375.2 213 75.1
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 3.8e-100 369.4 356 51.4
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.2e-99 365.9 209 76.6
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.7e-92 344.0 277 56.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.8e-65 254.2 199 64.3
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 2.3e-57 227.3 341 41.6
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.9e-29 132.9 93 61.3
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.2e-26 125.2 199 36.2
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 8.9e-25 119.0 80 62.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.0e-20 103.2 123 44.7
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 2.2e-07 61.2 77 44.2


User provided reference genes

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