Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 5.3e-41 170.6 88 100.0
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 2.7e-13 78.6 74 58.1
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 2.2e-10 68.9 71 57.7
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 3.7e-10 68.2 72 58.3
CSS0022493 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.3e-10 67.4 70 54.3
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 6.3e-10 67.4 72 55.6
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 1.8e-09 65.9 71 52.1
DCAR_008290 Daucus carota HOM05D007785 ORTHO05D008997 3.1e-09 65.1 79 46.8
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 4.1e-09 64.7 72 54.2
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 5.3e-09 64.3 71 50.7
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.0e-08 62.4 72 52.8
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 3.4e-08 61.6 80 45.0
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 1.0e-07 60.1 72 54.2
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 1.0e-07 60.1 72 51.4
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 1.0e-07 60.1 71 46.5
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.7e-07 59.3 74 48.6
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 2.2e-07 58.9 72 50.0
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 2.9e-07 58.5 73 50.7
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.0e-07 57.8 70 51.4
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 6.5e-07 57.4 71 52.1
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.1e-06 56.6 71 53.5
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 1.1e-06 56.6 73 46.6
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 1.4e-06 56.2 71 53.5
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 1.4e-06 56.2 64 57.8
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.9e-06 55.8 65 53.8
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 2.5e-06 55.5 73 47.9
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 3.2e-06 55.1 71 45.1
VMungo0251G2587 Vigna mungo HOM05D007785 ORTHO05D008997 3.2e-06 55.1 73 52.1
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 4.2e-06 54.7 72 47.2
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 4.2e-06 54.7 74 52.7
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 4.2e-06 54.7 73 45.2
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 7.2e-06 53.9 72 51.4
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.2e-06 53.9 72 51.4
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.2e-06 53.9 72 51.4
Gohir.D03G170000 Gossypium hirsutum HOM05D012518 ORTHO05D008997 7.2e-06 53.9 74 47.3
Gorai.003G180300 Gossypium raimondii HOM05D012518 ORTHO05D008997 7.2e-06 53.9 74 47.3
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 9.4e-06 53.5 72 45.8
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 9.4e-06 53.5 59 54.2


User provided reference genes

Program Settings