Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 4.2e-212 741.1 380 100.0
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 2.4e-122 443.0 381 63.8
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 9.0e-114 414.5 380 62.4
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.9e-111 406.8 384 61.7
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 4.6e-110 402.1 383 60.6
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 5.1e-109 398.7 397 58.7
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.8e-106 390.2 385 56.9
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 6.9e-106 388.3 385 56.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.1e-103 380.9 388 58.8
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.4e-103 380.6 381 55.6
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.5e-103 379.8 384 59.1
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.0e-100 370.2 401 53.9
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 4.4e-100 369.0 385 55.3
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 5.7e-100 368.6 384 54.9
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 9.7e-100 367.9 344 60.5
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 1.7e-99 367.1 388 54.1
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.2e-99 364.8 385 54.5
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 5.3e-98 362.1 382 53.9
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 7.0e-98 361.7 384 53.9
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 1.7e-96 357.1 394 54.1
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 6.5e-96 355.1 397 53.9
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 8.5e-96 354.8 381 53.3
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.9e-95 353.6 385 54.0
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 3.2e-95 352.8 439 48.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.2e-95 352.8 386 53.4
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 1.2e-94 350.9 389 53.0
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.6e-94 350.5 382 53.7
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.6e-94 350.5 373 53.4
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 2.3e-93 346.7 408 48.8
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 3.0e-93 346.3 382 52.1
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.0e-92 343.6 396 52.3
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.6e-92 343.2 396 51.8
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 2.6e-92 343.2 383 50.9
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.3e-91 340.9 397 51.1
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.1e-90 337.8 356 52.5
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.4e-90 337.4 395 52.4
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.2e-89 334.3 399 48.4
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.7e-89 331.6 399 48.1
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 2.2e-88 330.1 382 52.4
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 8.5e-88 328.2 388 48.2
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.1e-87 327.8 347 52.2
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.5e-87 327.4 399 48.1
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.5e-87 326.6 378 51.6
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.2e-87 325.9 342 51.2
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 4.7e-86 322.4 342 50.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.0e-85 319.3 402 46.8
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 5.2e-85 318.9 390 51.0
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 8.8e-85 318.2 381 49.9
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 8.8e-85 318.2 381 49.3
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.5e-84 317.4 381 49.6
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 4.4e-84 315.8 429 47.1
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 4.4e-84 315.8 384 51.6
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.5e-84 315.1 345 49.9
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 7.5e-84 315.1 380 49.2
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.1e-82 311.2 408 49.0
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 3.5e-81 306.2 377 48.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.9e-80 303.1 378 48.4
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.9e-79 300.4 395 45.1
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 4.2e-79 299.3 380 46.3
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 7.2e-79 298.5 378 48.7
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 7.2e-79 298.5 378 48.7
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 2.1e-78 297.0 383 47.5
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 3.6e-78 296.2 371 47.4
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.0e-77 294.7 377 47.5
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.4e-77 294.3 451 45.7
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 3.0e-77 293.1 365 46.0
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.2e-76 291.2 365 46.8
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 4.4e-76 289.3 349 48.4
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 4.4e-76 289.3 422 42.7
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.3e-75 287.7 389 48.3
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.3e-75 287.7 426 46.9
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.8e-75 286.6 384 46.6
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.1e-74 284.6 376 47.3
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 4.1e-74 282.7 390 43.8
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 4.5e-73 279.3 393 45.3
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.3e-72 276.9 324 52.2
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 2.5e-71 273.5 270 57.0
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 9.5e-71 271.6 301 49.5
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 1.4e-69 267.7 320 50.3
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 4.4e-68 262.7 377 48.0
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 7.5e-68 261.9 380 45.5
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.8e-66 257.3 386 44.3
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.8e-66 257.3 341 47.5
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.0e-66 255.4 358 43.6
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 5.9e-65 252.3 376 43.4
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 7.8e-65 251.9 390 43.3
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 7.8e-65 251.9 336 47.0
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 1.7e-64 250.8 312 48.1
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 2.3e-64 250.4 274 51.8
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 2.5e-63 246.9 212 64.2
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 3.3e-63 246.5 371 43.1
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.8e-61 240.7 340 44.4
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 2.3e-61 240.4 381 41.7
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 5.2e-61 239.2 302 47.7
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 1.5e-60 237.7 390 42.1
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 1.5e-60 237.7 390 42.1
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 2.6e-60 236.9 389 44.2
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.9e-59 233.4 379 42.5
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 3.2e-58 229.9 368 39.9
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 1.6e-57 227.6 383 42.3
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 4.3e-55 219.5 358 37.7
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 5.6e-55 219.2 390 38.2
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 3.6e-54 216.5 315 44.4
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.3e-51 208.0 310 43.5
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.7e-51 207.6 386 40.7
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.7e-51 207.6 268 44.8
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 4.9e-51 206.1 402 38.6
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.4e-50 203.8 310 42.9
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.0e-48 198.4 316 43.7
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.0e-48 198.4 316 43.7
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.0e-48 198.4 316 43.7
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 2.3e-48 197.2 308 42.5
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 2.8e-46 190.3 288 43.4
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 2.8e-46 190.3 288 43.4
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 8.6e-40 168.7 429 31.9
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 3.5e-25 120.2 308 31.8
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.1e-23 115.2 158 44.9
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 3.6e-22 110.2 229 32.8
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.9e-19 100.5 352 26.4
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 1.6e-17 94.7 373 26.3
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 6.7e-16 89.4 338 25.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.8e-13 81.3 72 52.8
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 2.4e-13 80.9 97 50.5
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 5.8e-12 76.3 88 52.3
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 6.5e-11 72.8 55 63.6
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 1.3e-06 58.5 406 21.9
Cpa.g.sc2.370 Carica papaya HOM05D005771 ORTHO05D007173 2.8e-06 57.4 59 57.6


User provided reference genes

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