Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 5.3e-187 657.5 327 100.0
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 3.7e-164 581.6 327 86.5
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.9e-159 563.9 327 84.1
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.1e-157 560.1 328 84.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.1e-157 560.1 328 84.1
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 6.3e-156 554.3 337 81.9
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 5.3e-155 551.2 327 82.3
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.9e-153 545.4 330 80.0
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 8.0e-151 537.3 332 78.3
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.1e-149 533.5 327 82.3
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 2.0e-149 532.7 329 80.5
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 5.7e-149 531.2 328 81.1
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.3e-148 530.0 317 82.3
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 8.2e-148 527.3 330 79.1
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.4e-147 526.6 328 82.0
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 7.0e-147 524.2 328 79.9
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.6e-146 523.1 328 79.9
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.9e-146 521.2 328 79.6
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.2e-145 519.2 323 80.5
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.9e-145 518.8 320 79.4
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 8.5e-145 517.3 329 78.7
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.5e-144 515.8 330 79.1
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.1e-143 512.7 328 76.5
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 4.7e-143 511.5 326 77.6
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 6.1e-143 511.1 331 76.7
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 1.8e-142 509.6 293 84.3
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.3e-142 509.2 328 78.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.3e-142 509.2 327 76.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.0e-141 506.1 328 75.6
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 3.3e-141 505.4 335 75.8
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 4.4e-141 505.0 328 76.2
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.4e-141 505.0 328 76.2
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 5.7e-141 504.6 335 75.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-140 503.4 328 76.5
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.2e-140 502.7 328 75.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.2e-140 502.7 425 64.0
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 2.8e-140 502.3 335 74.9
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 2.8e-140 502.3 328 75.6
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.8e-140 502.3 393 66.9
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.7e-140 501.9 328 77.7
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.8e-140 501.5 328 75.6
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.1e-139 500.4 308 80.2
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.8e-139 499.6 326 76.1
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-139 499.6 328 75.0
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 4.1e-139 498.4 336 75.0
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 7.0e-139 497.7 331 76.4
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.2e-138 496.9 326 75.5
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.2e-138 496.9 337 74.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.6e-138 496.5 336 74.4
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.6e-138 496.5 326 75.5
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.0e-138 496.1 326 76.4
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 3.5e-138 495.4 334 75.4
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.3e-137 493.4 337 73.9
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.7e-137 493.0 323 77.4
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.8e-137 491.9 337 73.6
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-136 490.0 337 73.3
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.5e-136 490.0 337 73.3
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.9e-136 489.6 338 73.4
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.9e-136 489.6 338 73.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 4.2e-136 488.4 328 75.0
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 4.2e-136 488.4 328 76.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 5.5e-136 488.0 326 74.5
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.1e-135 486.1 328 74.4
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.0e-134 483.8 309 75.4
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.8e-134 483.0 276 84.1
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.4e-133 478.8 325 75.4
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.7e-129 466.5 265 83.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.7e-129 466.5 325 72.3
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 3.8e-129 465.3 320 73.1
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.6e-129 464.2 292 78.4
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.9e-128 463.0 276 81.5
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 4.2e-128 461.8 292 78.1
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.8e-126 456.4 268 81.3
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 4.4e-125 451.8 324 72.8
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 2.2e-124 449.5 327 70.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 5.0e-121 438.3 254 81.9
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.1e-120 437.2 322 72.0
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.5e-120 436.8 328 69.5
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 6.1e-119 431.4 335 67.5
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 6.1e-119 431.4 249 83.5
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 9.8e-117 424.1 350 65.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.9e-115 419.9 300 70.3
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.2e-115 419.1 292 74.0
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 5.0e-113 411.8 292 72.3
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.5e-112 410.2 323 67.5
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.5e-112 409.5 307 66.4
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.2e-111 404.8 304 70.4
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.8e-110 403.3 262 75.2
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.7e-108 396.7 319 63.6
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 7.1e-107 391.3 269 73.2
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 3.0e-105 386.0 323 63.8
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.4e-102 377.1 316 60.8
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 6.0e-98 361.7 292 66.1
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.6e-95 353.6 313 56.9
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 3.1e-94 349.4 272 64.0
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.3e-92 344.0 293 57.7
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.7e-92 343.6 644 37.1
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 9.3e-91 337.8 322 59.0
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.5e-88 330.5 235 72.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.4e-85 319.3 214 74.8
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.7e-82 309.7 320 53.4
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.6e-79 300.4 166 84.9
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 5.1e-73 278.9 330 50.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.6e-72 275.4 329 50.8
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 8.1e-71 271.6 191 72.3
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 6.5e-68 261.9 196 63.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.2e-66 257.7 225 58.7
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.1e-64 251.1 154 77.3
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 6.2e-63 245.4 191 67.5
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-57 227.3 254 53.1
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 8.7e-57 224.9 178 63.5
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 5.0e-52 209.1 183 57.4
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.3e-49 200.3 153 65.4
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.1e-43 181.4 113 75.2
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.2e-42 177.9 155 60.6
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.4e-38 164.5 90 84.4
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 2.0e-32 144.1 276 35.1
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.7e-28 131.0 289 30.4
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.9e-28 130.2 97 69.1
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.6e-26 123.2 80 72.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 4.2e-19 99.8 354 26.3
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 7.2e-11 72.4 52 71.2
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 8.0e-10 68.9 50 70.0
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.0e-09 68.6 59 62.7
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 6.8e-09 65.9 46 65.2
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 2.9e-07 60.5 64 50.0


User provided reference genes

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