Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 7.1e-87 324.3 219 100.0
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 1.3e-59 233.8 220 75.5
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 1.6e-59 233.4 221 77.4
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.7e-59 232.3 221 75.1
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.4e-58 230.3 220 75.9
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 1.4e-58 230.3 220 75.9
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.4e-58 230.3 220 75.9
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.0e-57 226.5 221 77.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 8.5e-56 221.1 223 76.7
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 1.2e-54 217.2 221 71.9
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 3.6e-54 215.7 219 69.4
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 6.7e-53 211.5 224 72.3
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 1.1e-52 210.7 220 73.6
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 5.7e-52 208.4 216 72.2
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 5.7e-52 208.4 218 71.1
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 7.4e-52 208.0 224 71.9
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 9.7e-52 207.6 218 71.6
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.3e-51 207.2 221 70.6
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 2.2e-51 206.5 220 74.1
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 4.8e-51 205.3 217 70.5
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 8.2e-51 204.5 216 71.3
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 1.4e-50 203.8 216 72.7
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.1e-50 202.6 213 72.8
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 6.9e-50 201.4 216 68.5
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 1.2e-49 200.7 224 72.3
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 1.5e-49 200.3 216 71.8
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 1.5e-49 200.3 218 71.1
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 2.0e-49 199.9 223 70.4
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 2.6e-49 199.5 220 70.5
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 4.5e-49 198.7 216 68.1
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.0e-48 197.6 223 73.1
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.0e-48 197.6 221 70.1
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.3e-48 197.2 224 70.1
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 1.3e-48 197.2 220 67.7
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.7e-48 196.8 220 67.7
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 2.2e-48 196.4 221 67.4
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 3.8e-48 195.7 223 65.0
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 3.8e-48 195.7 218 71.6
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 6.5e-48 194.9 220 66.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 8.5e-48 194.5 221 73.3
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 1.1e-47 194.1 224 69.2
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 7.2e-47 191.4 219 70.8
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 1.2e-46 190.7 219 63.0
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.6e-46 190.3 229 64.2
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 6.1e-46 188.3 220 66.8
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 6.1e-46 188.3 221 67.4
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.3e-45 186.4 222 66.2
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 3.9e-45 185.7 219 71.2
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 6.7e-45 184.9 224 62.1
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 1.1e-44 184.1 218 70.2
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 1.5e-44 183.7 224 66.1
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 2.0e-44 183.3 228 61.0
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 2.6e-44 183.0 220 65.0
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 2.6e-44 183.0 218 65.6
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 3.3e-44 182.6 226 66.8
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 4.4e-44 182.2 229 58.5
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.8e-42 176.8 220 66.4
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 1.8e-42 176.8 217 62.2
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 3.1e-42 176.0 219 64.8
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 5.3e-42 175.3 215 70.7
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 5.3e-42 175.3 158 79.7
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 6.9e-42 174.9 225 63.6
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 6.9e-42 174.9 220 62.3
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 9.1e-42 174.5 220 65.0
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 2.0e-41 173.3 220 62.3
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 2.6e-41 172.9 218 66.5
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 3.4e-41 172.6 161 76.4
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 3.4e-41 172.6 219 67.1
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 7.7e-41 171.4 155 80.0
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 1.0e-40 171.0 219 65.8
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 1.3e-40 170.6 220 61.8
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.7e-40 170.2 219 65.3
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 6.5e-40 168.3 232 60.8
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.1e-39 167.5 143 67.1
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 1.4e-39 167.2 216 66.7
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.9e-39 166.8 219 62.6
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.2e-38 164.1 216 64.8
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 2.7e-38 162.9 223 62.8
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 3.6e-38 162.5 171 58.5
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 3.6e-38 162.5 217 65.0
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.4e-37 160.6 218 61.9
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 6.7e-37 158.3 219 63.5
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 1.1e-36 157.5 176 56.2
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 1.1e-34 151.0 224 48.7
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 3.1e-34 149.4 220 63.2
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 4.1e-34 149.1 158 76.6
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.7e-32 143.7 128 74.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.5e-31 140.6 219 53.9
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 3.0e-29 132.9 170 67.1
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 2.0e-28 130.2 229 57.2
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.3e-28 129.4 125 80.8
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 5.7e-28 128.6 150 74.0
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 3.7e-27 125.9 158 60.8
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 1.7e-24 117.1 159 64.2
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 7.2e-23 111.7 73 83.6
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 2.7e-22 109.8 105 76.2
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 4.7e-22 109.0 161 62.1
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 6.1e-22 108.6 85 68.2
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 8.0e-22 108.2 161 60.9
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 1.0e-21 107.8 108 80.6
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.3e-21 106.7 164 60.4
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 6.8e-21 105.1 105 58.1
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 8.8e-21 104.8 216 33.8
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.2e-20 104.4 105 80.0
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 2.8e-19 99.8 105 81.9
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 8.3e-19 98.2 157 45.9
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 2.2e-16 90.1 85 57.6
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 5.5e-15 85.5 85 49.4
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 4.7e-14 82.4 60 73.3
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.3e-13 80.1 132 45.5
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 5.6e-07 58.9 81 44.4
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 7.3e-07 58.5 139 38.1
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 3.6e-06 56.2 106 45.3


User provided reference genes

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