Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 6.4e-268 927.5 766 100.0
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 4.3e-107 393.3 769 56.3
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-105 388.7 769 58.6
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.4e-105 388.3 746 61.3
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 5.0e-103 379.8 769 47.6
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.2e-101 375.2 769 57.7
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.2e-101 375.2 751 55.5
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.1e-101 374.4 751 52.1
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 3.0e-100 370.5 756 52.1
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.2e-94 349.4 768 52.2
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-91 342.0 752 54.9
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.3e-91 340.5 768 49.9
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.7e-90 338.2 718 53.5
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 2.8e-90 337.4 769 56.7
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 8.2e-90 335.9 767 45.4
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.6e-88 331.6 752 56.4
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.6e-88 330.9 769 53.3
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.6e-88 330.9 749 47.0
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 6.5e-87 326.2 757 53.5
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.9e-86 324.7 753 57.8
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.6e-85 320.5 759 55.9
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 3.6e-85 320.5 752 54.9
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.5e-83 315.1 767 49.5
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.0e-83 314.7 758 56.2
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 4.8e-82 310.1 770 51.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 3.1e-81 307.4 751 55.7
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 4.1e-81 307.0 759 56.4
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.3e-81 306.6 740 54.2
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 7.0e-81 306.2 769 50.5
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.0e-80 304.7 744 50.4
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.2e-77 295.4 745 52.2
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 8.0e-77 292.7 734 49.7
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 8.8e-76 289.3 747 47.0
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 2.6e-75 287.7 753 55.5
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 3.4e-75 287.3 751 48.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 4.4e-75 287.0 733 51.2
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 8.3e-74 282.7 754 47.3
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.8e-73 281.6 779 40.1
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 3.1e-73 280.8 773 55.1
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 4.5e-72 276.9 723 45.8
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 4.5e-72 276.9 726 54.3
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.7e-71 275.0 751 52.3
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 3.8e-71 273.9 759 54.0
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.5e-70 271.9 753 50.9
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.8e-69 267.7 767 50.6
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 2.0e-67 261.5 770 44.5
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 3.4e-67 260.8 684 58.0
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 7.5e-67 259.6 759 51.3
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 9.8e-67 259.2 750 47.2
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 3.7e-66 257.3 769 54.2
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 4.5e-64 250.4 773 47.6
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 5.9e-64 250.0 437 50.6
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.0e-63 249.2 767 49.9
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.3e-63 248.8 752 53.3
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 3.9e-63 247.3 740 51.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-61 242.3 749 52.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 1.4e-60 238.8 771 49.7
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 6.8e-60 236.5 749 45.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 2.0e-59 235.0 751 44.5
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 2.9e-58 231.1 752 48.4
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 6.4e-58 229.9 779 48.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 8.3e-58 229.6 481 45.3
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 8.3e-58 229.6 481 45.3
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.4e-57 228.8 766 45.4
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.2e-57 227.6 752 48.4
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 3.5e-56 224.2 752 49.3
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.6e-56 223.8 761 49.7
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 6.0e-56 223.4 437 48.7
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 3.3e-54 217.6 413 47.5
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.1e-52 212.6 717 51.0
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.3e-52 211.5 780 49.2
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 8.9e-52 209.5 769 46.7
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 1.5e-51 208.8 740 44.9
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 2.6e-51 208.0 435 45.3
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.4e-51 207.6 773 50.6
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.7e-50 205.3 754 49.2
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.9e-50 204.5 779 48.0
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 8.3e-50 203.0 770 49.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.1e-49 202.6 776 45.6
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.9e-46 191.8 313 55.0
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.1e-45 188.3 748 49.3
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 6.2e-45 186.8 770 39.0
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.4e-44 185.7 763 48.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 1.8e-44 185.3 751 48.9
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 6.8e-44 183.3 768 50.9
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.4e-41 174.9 758 43.7
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.9e-38 165.2 749 43.3
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 2.8e-37 161.4 747 43.4
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 4.7e-37 160.6 343 47.8
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 2.4e-36 158.3 743 49.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.1e-36 157.9 746 41.7
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 4.0e-36 157.5 780 43.3
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.2e-34 151.8 501 38.1
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 2.1e-29 135.2 707 47.8
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.8e-28 132.1 734 45.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 1.3e-26 125.9 744 38.3
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 3.2e-25 121.3 198 41.4
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.5e-24 117.9 340 43.2
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.5e-24 117.9 132 51.5
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.9e-22 112.1 772 36.3
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 2.5e-22 111.7 176 43.2
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.9e-18 97.4 368 26.9
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 6.4e-18 97.1 126 51.6
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 6.0e-16 90.5 764 38.6
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.0e-15 89.7 263 45.6
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.8e-15 89.0 405 36.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.1e-14 86.3 122 46.7
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.5e-14 85.9 161 37.3
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 9.0e-12 76.6 147 36.1
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.2e-11 76.3 743 47.0
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.6e-11 73.6 77 59.7
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 2.9e-10 71.6 157 36.3
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 7.9e-08 63.5 84 50.0


User provided reference genes

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