Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g21120 Coffea canephora HOM05D000811 ORTHO05D007840 4.5e-56 221.1 116 100.0
Cc00_g23380 Coffea canephora HOM05D000811 ORTHO05D007840 1.9e-46 189.1 116 87.9
Lj2A466G44 Lonicera japonica HOM05D000811 ORTHO05D007840 6.3e-26 120.9 98 64.3
Lj2A474G39 Lonicera japonica HOM05D000811 ORTHO05D007840 6.3e-26 120.9 98 64.3
Prupe.1G202800 Prunus persica HOM05D000811 ORTHO05D007840 2.4e-25 119.0 93 66.7
GSVIVG01018799001 Vitis vinifera HOM05D000811 ORTHO05D007840 2.4e-25 119.0 93 66.7
CSS0008295 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 3.5e-24 115.2 92 65.2
Dinv40075 Davidia involucrata HOM05D000811 ORTHO05D007840 5.9e-24 114.4 95 63.2
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 7.7e-24 114.0 84 69.0
Lsat_1_v5_gn_4_146761 Lactuca sativa HOM05D000811 ORTHO05D007840 1.3e-23 113.2 92 63.0
VMungo0251G2049 Vigna mungo HOM05D000811 ORTHO05D007840 1.7e-23 112.8 92 62.0
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 5.0e-23 111.3 85 68.2
Solyc02g084030.3 Solanum lycopersicum HOM05D000811 ORTHO05D007840 8.5e-23 110.5 88 65.9
MSTRG.2702 Avicennia marina HOM05D000811 ORTHO05D007840 1.1e-22 110.2 106 61.3
Glyma.02G049400 Glycine max HOM05D000811 ORTHO05D007840 1.5e-22 109.8 94 61.7
Sopen02g028830 Solanum pennellii HOM05D000811 ORTHO05D007840 1.9e-22 109.4 88 64.8
Oeu062503.1 Olea europaea HOM05D000811 ORTHO05D007840 2.5e-22 109.0 92 63.0
PGSC0003DMG400003634 Solanum tuberosum HOM05D000811 ORTHO05D007840 2.5e-22 109.0 88 64.8
vmacro18419 Vaccinium macrocarpon HOM05D000811 ORTHO05D007840 2.5e-22 109.0 78 70.5
CAN.G1671.2 Capsicum annuum HOM05D000811 ORTHO05D007840 3.2e-22 108.6 91 63.7
CiPaw.07G057400 Carya illinoinensis HOM05D000811 ORTHO05D007840 5.5e-22 107.8 87 66.7
Glyma.16G129800 Glycine max HOM05D000811 ORTHO05D007840 7.2e-22 107.5 82 68.3
Thecc.01G020800 Theobroma cacao HOM05D000811 ORTHO05D007840 7.2e-22 107.5 89 66.3
Cpa.g.sc6.232 Carica papaya HOM05D000811 ORTHO05D007840 1.2e-21 106.7 94 64.9
Ca_22370_v3 Cicer arietinum L. HOM05D000811 ORTHO05D007840 1.2e-21 106.7 73 72.6
QL06p033557 Quercus lobata HOM05D000811 ORTHO05D007840 1.2e-21 106.7 99 62.6
SGA_v2.0_scaffold137G35079 Striga asiatica HOM05D000811 ORTHO05D007840 1.2e-21 106.7 97 59.8
THA.LOC104807489 Tarenaya hassleriana HOM05D000811 ORTHO05D007840 1.2e-21 106.7 94 58.5
Lj4g0023417 Lotus japonicus HOM05D000811 ORTHO05D007840 1.6e-21 106.3 87 66.7
TPR.G30060 Trifolium pratense HOM05D000811 ORTHO05D007840 1.6e-21 106.3 85 63.5
COL.COLO4_21928 Corchorus olitorius HOM05D000811 ORTHO05D007840 2.1e-21 105.9 100 58.0
Medtr8g076060 Medicago truncatula HOM05D000811 ORTHO05D007840 2.1e-21 105.9 99 61.6
Nn5g29276 Nelumbo nucifera HOM05D000811 ORTHO05D007840 2.1e-21 105.9 85 63.5
Psat4g098520 Pisum sativum HOM05D000811 ORTHO05D007840 2.1e-21 105.9 94 61.7
RcHm_v2.0_Chr0c32g0501631 Rosa chinensis HOM05D000811 ORTHO05D007840 2.1e-21 105.9 94 60.6
Atru.chr3.786 Acer truncatum HOM05D000811 ORTHO05D007840 2.7e-21 105.5 100 60.0
Lalb_Chr16g0391201 Lupinus albus HOM05D000811 ORTHO05D007840 2.7e-21 105.5 94 60.6
CAN.G724.41 Capsicum annuum HOM05D000811 ORTHO05D007840 3.6e-21 105.1 84 64.3
CsaV3_6G046980 Cucumis sativus L. HOM05D000811 ORTHO05D007840 3.6e-21 105.1 104 56.7
Hma1.2p1_0743F.1_g211546 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 3.6e-21 105.1 108 58.3
Hma1.2p1_2281F.1_g318770 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 3.6e-21 105.1 92 64.1
Hma1.2p1_2281F.1_g318780 Hydrangea macrophylla HOM05D000811 ORTHO05D007840 3.6e-21 105.1 108 58.3
Nitab4.5_0004254g0050 Nicotiana tabacum HOM05D000811 ORTHO05D007840 3.6e-21 105.1 84 66.7
PGR119G1393 Punica granatum HOM05D000811 ORTHO05D007840 3.6e-21 105.1 97 62.9
ECA232G2345 Erigeron canadensis HOM05D000811 ORTHO05D007840 4.7e-21 104.8 79 65.8
Migut.H01151 Erythranthe guttata HOM05D000811 ORTHO05D007840 4.7e-21 104.8 97 59.8
MELO3C007891.2 Cucumis melo HOM05D000811 ORTHO05D007840 6.1e-21 104.4 104 56.7
FAN02G1033 Fragaria x ananassa HOM05D000811 ORTHO05D007840 6.1e-21 104.4 96 58.3
HanXRQChr15g0487231 Helianthus annuus HOM05D000811 ORTHO05D007840 6.1e-21 104.4 92 59.8
Manes.02G103100 Manihot esculenta HOM05D000811 ORTHO05D007840 6.1e-21 104.4 87 60.9
Nitab4.5_0005721g0040 Nicotiana tabacum HOM05D000811 ORTHO05D007840 6.1e-21 104.4 84 66.7
Peaxi162Scf00083g00821 Petunia axillaris HOM05D000811 ORTHO05D007840 6.1e-21 104.4 85 67.1
RcHm_v2.0_Chr3g0483821 Rosa chinensis HOM05D000811 ORTHO05D007840 6.1e-21 104.4 95 58.9
Ciclev10026355m.g Citrus clementina HOM05D000811 ORTHO05D007840 8.0e-21 104.0 97 56.7
FAN05G3534 Fragaria x ananassa HOM05D000811 ORTHO05D007840 8.0e-21 104.0 96 58.3
SalBow3G3717 Salvia bowleyana HOM05D000811 ORTHO05D007840 8.0e-21 104.0 106 57.5
ClCG01G020180 Citrullus lanatus HOM05D000811 ORTHO05D007840 1.0e-20 103.6 104 57.7
CSS0011847 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D007840 1.4e-20 103.2 91 62.6
Haze_03790 Corylus avellana HOM05D000811 ORTHO05D007840 1.4e-20 103.2 111 55.0
Phvul.003G260900 Phaseolus vulgaris HOM05D000811 ORTHO05D007840 1.4e-20 103.2 87 59.8
TAR625G1510 Trochodendron aralioides HOM05D000811 ORTHO05D007840 1.4e-20 103.2 85 62.4
arahy.Tifrunner.gnm1.ann1.IAHM14 Arachis hypogaea HOM05D000811 ORTHO05D007840 1.8e-20 102.8 87 64.4
arahy.Tifrunner.gnm1.ann1.JKZZ7D Arachis hypogaea HOM05D000811 ORTHO05D007840 1.8e-20 102.8 87 64.4
FvH4_6g24560 Fragaria vesca HOM05D000811 ORTHO05D007840 1.8e-20 102.8 96 56.2
FAN09G1557 Fragaria x ananassa HOM05D000811 ORTHO05D007840 1.8e-20 102.8 96 57.3
FAN14G3764 Fragaria x ananassa HOM05D000811 ORTHO05D007840 1.8e-20 102.8 96 56.2
RcHm_v2.0_Chr3g0483661 Rosa chinensis HOM05D000811 ORTHO05D007840 2.3e-20 102.4 94 58.5
Aa31LG8G15210 Aethionema arabicum HOM05D000811 ORTHO05D007840 5.2e-20 101.3 87 60.9
PSO541G4766 Papaver somniferum HOM05D000811 ORTHO05D007840 5.2e-20 101.3 89 60.7
Eucgr.J02417 Eucalyptus grandis HOM05D000811 ORTHO05D007840 6.8e-20 100.9 75 69.3
PSO675G0258 Papaver somniferum HOM05D000811 ORTHO05D007840 6.8e-20 100.9 74 68.9
Duzib147G1611 Durio zibethinus HOM05D000811 ORTHO05D007840 8.8e-20 100.5 85 63.5
Sp3g31460 Schrenkiella parvula HOM05D000811 ORTHO05D007840 8.8e-20 100.5 87 60.9
Hund14040 Selenicereus undatus HOM05D000811 ORTHO05D007840 8.8e-20 100.5 95 62.1
Sc16g0002060 Simmondsia chinensis HOM05D000811 ORTHO05D007840 8.8e-20 100.5 101 55.4
TWI09G0870 Tripterygium wilfordii HOM05D000811 ORTHO05D007840 8.8e-20 100.5 96 58.3
Gohir.A12G060100 Gossypium hirsutum HOM05D000811 ORTHO05D007840 1.5e-19 99.8 76 67.1
CARHR108520 Cardamine hirsuta HOM05D000811 ORTHO05D007840 2.0e-19 99.4 92 55.4
Duzib264G0346 Durio zibethinus HOM05D000811 ORTHO05D007840 2.0e-19 99.4 87 62.1
AL3G51180 Arabidopsis lyrata HOM05D000811 ORTHO05D007840 2.6e-19 99.0 78 62.8
Lalb_Chr05g0229871 Lupinus albus HOM05D000811 ORTHO05D007840 2.6e-19 99.0 87 60.9
Actinidia22988 Actinidia chinensis HOM05D000811 ORTHO05D007840 4.4e-19 98.2 54 83.3
AUR62043612 Chenopodium quinoa HOM05D000811 ORTHO05D007840 4.4e-19 98.2 87 59.8
AUR62044454 Chenopodium quinoa HOM05D000811 ORTHO05D007840 4.4e-19 98.2 87 59.8
Sed0020033 Sechium edule HOM05D000811 ORTHO05D007840 4.4e-19 98.2 101 55.4
Thhalv10022823m.g Eutrema salsugineum HOM05D000811 ORTHO05D007840 5.7e-19 97.8 90 54.4
Gohir.D12G060200 Gossypium hirsutum HOM05D000811 ORTHO05D007840 5.7e-19 97.8 100 57.0
Gorai.008G063300 Gossypium raimondii HOM05D000811 ORTHO05D007840 5.7e-19 97.8 100 57.0
AT2G18030 Arabidopsis thaliana HOM05D000811 ORTHO05D007840 7.5e-19 97.4 84 58.3
BolC9t54263H Brassica oleracea HOM05D000811 ORTHO05D007840 7.5e-19 97.4 78 61.5
BraA09t36813Z Brassica rapa HOM05D000811 ORTHO05D007840 7.5e-19 97.4 78 61.5
Potri.007G012900 Populus trichocarpa HOM05D000811 ORTHO05D007840 7.5e-19 97.4 82 65.9
HPP92_025838 Vanilla planifolia HOM05D000811 ORTHO05D007840 9.7e-19 97.1 106 50.9
DCAR_021499 Daucus carota HOM05D000811 ORTHO05D007840 1.3e-18 96.7 74 64.9
BcaC04g22934 Brassica carinata HOM05D000811 ORTHO05D007840 2.2e-18 95.9 78 60.3
C09p13720 Brassica napus HOM05D000811 ORTHO05D007840 2.2e-18 95.9 78 60.3
CDE08G1305 Ceratophyllum demersum HOM05D000811 ORTHO05D007840 2.2e-18 95.9 103 50.5
Eucgr.J02409 Eucalyptus grandis HOM05D000811 ORTHO05D007840 3.7e-18 95.1 99 57.6
BcaB07g31695 Brassica carinata HOM05D000811 ORTHO05D007840 6.3e-18 94.4 97 52.6
A09p11680 Brassica napus HOM05D000811 ORTHO05D007840 8.3e-18 94.0 78 59.0
Ah.02g124470 Amaranthus hybridus HOM05D000811 ORTHO05D007840 1.4e-17 93.2 95 54.7
Carub.0003s3218 Capsella rubella HOM05D000811 ORTHO05D007840 1.8e-17 92.8 91 57.1
Sabra07G0009900 Salix brachista HOM05D000811 ORTHO05D007840 4.1e-17 91.7 96 54.2
Os06g0138100 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D007840 7.0e-17 90.9 51 80.4
Zm00001eb377760 Zea mays HOM05D000811 ORTHO05D007840 7.0e-17 90.9 84 56.0
unitig_37.g12157 Utricularia gibba HOM05D000811 ORTHO05D007840 9.1e-17 90.5 85 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1381 Anthoceros agrestis HOM05D000811 ORTHO05D007840 1.6e-16 89.7 72 55.6
ATR0147G018 Amborella trichopoda HOM05D000811 ORTHO05D007840 1.3e-15 86.7 85 51.8
Mapoly0044s0097 Marchantia polymorpha HOM05D000811 ORTHO05D007840 2.5e-14 82.4 56 66.1
SMO239G0139 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 7.2e-14 80.9 50 68.0
CBR_g40417 Chara braunii HOM05D000811 ORTHO05D007840 1.6e-13 79.7 60 60.0
Pp3c19_10080 Physcomitrium patens HOM05D000811 ORTHO05D007840 2.1e-13 79.3 61 59.0
CBR_g40629 Chara braunii HOM05D000811 ORTHO05D007840 3.6e-13 78.6 60 58.3
SMO239G0160 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 9.8e-11 70.5 47 66.0
SMO239G0133 Selaginella moellendorffii HOM05D000811 ORTHO05D007840 2.4e-09 65.9 49 61.2
Haze_26512 Corylus avellana HOM05D000811 ORTHO05D001558 7.7e-08 60.8 50 50.0
Cfa007901 Carpinus fangiana HOM05D000811 ORTHO05D011421 2.3e-07 59.3 74 43.2
Cc04_g10780 Coffea canephora HOM05D000811 ORTHO05D001558 5.5e-06 54.7 80 41.2
Dinv34802 Davidia involucrata HOM05D000811 ORTHO05D011421 5.5e-06 54.7 69 40.6
Haze_14179 Corylus avellana HOM05D000811 ORTHO05D011421 7.2e-06 54.3 72 43.1
Duzib138G0733 Durio zibethinus HOM05D000811 ORTHO05D011421 9.5e-06 53.9 73 38.4


User provided reference genes

Program Settings