Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g20500 Coffea canephora HOM05D000176 ORTHO05D000106 4.3e-45 184.1 83 100.0
Cc01_g16020 Coffea canephora HOM05D000176 ORTHO05D000106 6.1e-23 110.5 127 43.3
Cc08_g06400 Coffea canephora HOM05D000176 ORTHO05D000106 2.8e-20 101.7 127 40.2
Cc00_g04610 Coffea canephora HOM05D000176 ORTHO05D000106 1.1e-19 99.8 86 59.3
Cc00_g31110 Coffea canephora HOM05D000176 ORTHO05D000106 5.3e-19 97.4 128 41.4
Rhsim10G0041500 Rhododendron simsii HOM05D000176 ORTHO05D000106 6.3e-12 73.9 126 34.1
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 7.0e-11 70.5 127 32.3
Cc00_g33730 Coffea canephora HOM05D000176 ORTHO05D000106 2.0e-10 68.9 105 38.1
Rhsim12G0118600 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.0e-10 68.9 108 36.1
Solyc08g016802.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.5e-10 68.2 98 31.6
Rhsim01G0238100 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.0e-09 66.6 127 30.7
Rhsim06G0170700 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.0e-09 66.6 127 30.7
Rhsim09G0099200 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.3e-09 66.2 104 33.7
Rhsim13G0134200 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.2e-09 65.5 127 29.9
RhsimUnG0177100 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.2e-09 65.5 127 29.9
Solyc11g044453.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.2e-09 65.5 80 37.5
CSS0049024 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.5e-09 63.9 107 36.4
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-08 63.2 138 26.8
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-08 63.2 138 26.8
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-08 63.2 138 26.8
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-08 63.2 138 26.8
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 62.8 138 26.8
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 62.8 138 26.8
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 62.8 138 26.8
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.9e-08 62.4 136 26.5
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.9e-08 62.4 81 35.8
Rhsim05G0077700 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.2e-08 61.6 123 28.5
SGA_v2.0_scaffold42G15967 Striga asiatica HOM05D000176 ORTHO05D000106 5.5e-08 60.8 109 30.3
Peaxi162Scf00613g00816 Petunia axillaris HOM05D000176 ORTHO05D000106 1.6e-07 59.3 81 39.5
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-07 59.3 109 35.8
Solyc07g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.1e-07 58.9 117 29.1
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Solyc03g005550.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Solyc10g008267.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-07 58.5 134 27.6
Solyc08g067125.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.6e-07 58.2 134 27.6
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.7e-07 57.8 138 26.1
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 4.7e-07 57.8 133 25.6
Sopen01g011760 Solanum pennellii HOM05D000176 ORTHO05D000106 4.7e-07 57.8 133 24.8
Cc03_g09280 Coffea canephora HOM05D000176 ORTHO05D000106 6.1e-07 57.4 119 26.9
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-06 56.6 138 26.1
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.0e-06 56.6 96 30.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.0e-06 56.6 94 31.9
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.0e-06 56.6 94 31.9
PGSC0003DMG400000655 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.0e-06 56.6 133 24.1
CSS0043966 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.4e-06 56.2 136 26.5
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.4e-06 56.2 138 26.1
Solyc12g042607.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.8e-06 55.8 80 36.2
CSS0025783 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 55.5 138 26.1
CSS0037304 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 55.5 138 26.1
QL07p006103 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-06 55.5 103 32.0
CSS0028824 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.0e-06 55.1 120 28.3
Peaxi162Scf00038g02647 Petunia axillaris HOM05D000115 ORTHO05D003511 3.0e-06 55.1 48 41.7
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.0e-06 55.1 75 34.7
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 3.0e-06 55.1 61 36.1
PGSC0003DMG400025677 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.0e-06 55.1 60 36.7
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 4.0e-06 54.7 130 30.0
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 4.0e-06 54.7 133 23.3
MELO3C027673.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.2e-06 54.3 80 31.2
Rhsim05G0159500 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.2e-06 54.3 49 42.9
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.8e-06 53.9 137 25.5
QL02p042411 Quercus lobata HOM05D002707 ORTHO05D002925 6.8e-06 53.9 91 34.1
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.8e-06 53.9 133 24.1
Cc10_g12350 Coffea canephora HOM05D000176 ORTHO05D000106 8.8e-06 53.5 57 36.8
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 8.8e-06 53.5 130 29.2
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 8.8e-06 53.5 130 28.5
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 8.8e-06 53.5 134 25.4


User provided reference genes

Program Settings