Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g14720 Coffea canephora HOM05D000018 ORTHO05D007339 1.0e-75 286.6 137 100.0
Cc06_g14920 Coffea canephora HOM05D000018 ORTHO05D007339 1.3e-46 189.9 109 81.7
QL10p016576 Quercus lobata HOM05D000018 ORTHO05D007339 1.5e-26 123.2 107 54.2
Duzib068G1463 Durio zibethinus HOM05D000018 ORTHO05D007339 4.4e-26 121.7 109 54.1
Eucgr.B00478 Eucalyptus grandis HOM05D000018 ORTHO05D007339 7.4e-26 120.9 96 60.4
TAR371G0680 Trochodendron aralioides HOM05D000018 ORTHO05D007339 2.8e-25 119.0 93 59.1
Aqoxy3G00672 Aquilegia oxysepala HOM05D000018 ORTHO05D007339 3.7e-25 118.6 109 54.1
Eucgr.B00476 Eucalyptus grandis HOM05D000018 ORTHO05D007339 3.7e-25 118.6 96 60.4
Glyma.04G170500 Glycine max HOM05D000018 ORTHO05D007339 3.7e-25 118.6 107 52.3
CSS0031308 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D007339 8.2e-25 117.5 106 52.8
Gohir.A07G063800 Gossypium hirsutum HOM05D000018 ORTHO05D007339 1.1e-24 117.1 109 54.1
Gohir.D07G068600 Gossypium hirsutum HOM05D000018 ORTHO05D007339 1.1e-24 117.1 109 54.1
Gorai.001G072100 Gossypium raimondii HOM05D000018 ORTHO05D007339 1.1e-24 117.1 109 54.1
TWI81G0078 Tripterygium wilfordii HOM05D000018 ORTHO05D007339 2.4e-24 115.9 93 59.1
Sed0026857 Sechium edule HOM05D000018 ORTHO05D007339 3.1e-24 115.5 93 58.1
Cfa018957 Carpinus fangiana HOM05D000018 ORTHO05D007339 4.1e-24 115.2 92 60.9
Manes.06G093800 Manihot esculenta HOM05D000018 ORTHO05D007339 4.1e-24 115.2 93 58.1
Dinv19951 Davidia involucrata HOM05D000018 ORTHO05D007339 5.3e-24 114.8 106 52.8
PGSC0003DMG403000594 Solanum tuberosum HOM05D000018 ORTHO05D007339 7.0e-24 114.4 93 55.9
Potri.012G069200 Populus trichocarpa HOM05D000018 ORTHO05D007339 1.6e-23 113.2 107 53.3
DCAR_019461 Daucus carota HOM05D000018 ORTHO05D007339 4.5e-23 111.7 92 58.7
MSTRG.23023 Avicennia marina HOM05D000018 ORTHO05D007339 5.9e-23 111.3 93 57.0
CAN.G407.120 Capsicum annuum HOM05D000018 ORTHO05D007339 5.9e-23 111.3 95 56.8
Ca_13690_v3 Cicer arietinum L. HOM05D002208 ORTHO05D007339 5.9e-23 111.3 107 51.4
DCAR_031577 Daucus carota HOM05D000018 ORTHO05D007339 5.9e-23 111.3 133 48.1
Nn4g23139 Nelumbo nucifera HOM05D000018 ORTHO05D007339 5.9e-23 111.3 93 55.9
Medtr3g040410 Medicago truncatula HOM05D000018 ORTHO05D007339 7.7e-23 110.9 107 51.4
Solyc03g116280.3 Solanum lycopersicum HOM05D000018 ORTHO05D007339 7.7e-23 110.9 93 53.8
Solyc03g116260.3 Solanum lycopersicum HOM05D000018 ORTHO05D007339 1.3e-22 110.2 95 55.8
ClCG04G012360 Citrullus lanatus HOM05D000018 ORTHO05D007339 1.7e-22 109.8 93 57.0
CsaV3_1G005350 Cucumis sativus L. HOM05D000018 ORTHO05D007339 1.7e-22 109.8 93 55.9
Migut.I00168 Erythranthe guttata HOM05D000018 ORTHO05D007339 1.7e-22 109.8 106 50.0
PGSC0003DMG400000595 Solanum tuberosum HOM05D000018 ORTHO05D007339 1.7e-22 109.8 93 55.9
PGSC0003DMG404000594 Solanum tuberosum HOM05D000018 ORTHO05D007339 1.7e-22 109.8 93 54.8
CiPaw.11G043000 Carya illinoinensis HOM05D000018 ORTHO05D007339 2.2e-22 109.4 95 54.7
Sopen03g035210 Solanum pennellii HOM05D000018 ORTHO05D007339 2.2e-22 109.4 133 43.6
Cc04_g16900 Coffea canephora HOM05D000018 ORTHO05D007339 2.9e-22 109.0 93 57.0
COL.COLO4_24535 Corchorus olitorius HOM05D000018 ORTHO05D007339 3.8e-22 108.6 98 56.1
Eucgr.B00474 Eucalyptus grandis HOM05D000018 ORTHO05D007339 3.8e-22 108.6 96 56.2
CSS0007851 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D007339 5.0e-22 108.2 92 53.3
Cc04_g16830 Coffea canephora HOM05D000018 ORTHO05D007339 5.0e-22 108.2 90 58.9
MELO3C035771.2 Cucumis melo HOM05D000018 ORTHO05D007339 5.0e-22 108.2 93 53.8
Solyc03g116270.3 Solanum lycopersicum HOM05D000018 ORTHO05D007339 5.0e-22 108.2 133 42.9
PSO017G5680 Papaver somniferum HOM05D000018 ORTHO05D007339 6.5e-22 107.8 107 52.3
PSO478G3841 Papaver somniferum HOM05D000018 ORTHO05D007339 8.5e-22 107.5 107 52.3
PGSC0003DMG400000593 Solanum tuberosum HOM05D000018 ORTHO05D007339 8.5e-22 107.5 107 50.5
Zm00001eb431960 Zea mays HOM05D000018 ORTHO05D007339 8.5e-22 107.5 92 54.3
Lsat_1_v5_gn_4_108460 Lactuca sativa HOM05D000018 ORTHO05D007339 1.1e-21 107.1 106 50.0
PGSC0003DMG401000594 Solanum tuberosum HOM05D000018 ORTHO05D007339 1.1e-21 107.1 92 56.5
TAR371G0918 Trochodendron aralioides HOM05D000018 ORTHO05D007339 1.1e-21 107.1 106 48.1
Cc04_g16860 Coffea canephora HOM05D000018 ORTHO05D007339 1.5e-21 106.7 107 48.6
TPR.G11912 Trifolium pratense HOM05D000018 ORTHO05D007339 2.5e-21 105.9 96 55.2
Cc04_g16840 Coffea canephora HOM05D000018 ORTHO05D007339 4.2e-21 105.1 107 48.6
DCAR_016542 Daucus carota HOM05D000018 ORTHO05D007339 4.2e-21 105.1 106 49.1
Nitab4.5_0002257g0180 Nicotiana tabacum HOM05D000018 ORTHO05D007339 4.2e-21 105.1 93 52.7
COL.COLO4_24539 Corchorus olitorius HOM05D000018 ORTHO05D007339 5.5e-21 104.8 106 49.1
Eucgr.B00473 Eucalyptus grandis HOM05D000018 ORTHO05D007339 7.2e-21 104.4 92 54.3
Sopen03g035200 Solanum pennellii HOM05D000018 ORTHO05D007339 7.2e-21 104.4 93 53.8
CsaV3_1G005340 Cucumis sativus L. HOM05D000018 ORTHO05D007339 9.4e-21 104.0 105 46.7
Sed0000930 Sechium edule HOM05D000018 ORTHO05D007339 9.4e-21 104.0 93 53.8
DCAR_016541 Daucus carota HOM05D000018 ORTHO05D007339 1.6e-20 103.2 88 58.0
ECA232G4952 Erigeron canadensis HOM05D000018 ORTHO05D007339 1.6e-20 103.2 106 49.1
Nitab4.5_0004103g0050 Nicotiana tabacum HOM05D000018 ORTHO05D007339 1.6e-20 103.2 69 66.7
Sc04g0002570 Simmondsia chinensis HOM05D000018 ORTHO05D007339 1.6e-20 103.2 93 53.8
MELO3C035772.2 Cucumis melo HOM05D000018 ORTHO05D007339 2.1e-20 102.8 105 46.7
Oeu006501.1 Olea europaea HOM05D000018 ORTHO05D007339 3.6e-20 102.1 94 51.1
Oeu006503.1 Olea europaea HOM05D000018 ORTHO05D007339 3.6e-20 102.1 92 52.2
Os04g0643500 Oryza sativa ssp. japonica HOM05D000018 ORTHO05D007339 4.7e-20 101.7 92 48.9
Nitab4.5_0001188g0030 Nicotiana tabacum HOM05D002208 ORTHO05D007339 1.8e-19 99.8 92 52.2
CAN.G407.121 Capsicum annuum HOM05D000018 ORTHO05D007339 2.3e-19 99.4 85 51.8
Zm00001eb068730 Zea mays HOM05D000018 ORTHO05D007339 2.3e-19 99.4 92 54.3
Migut.I00169 Erythranthe guttata HOM05D000018 ORTHO05D007339 4.0e-19 98.6 111 45.9
Sopen06g027170 Solanum pennellii HOM05D000018 ORTHO05D007339 5.2e-19 98.2 92 50.0
CAN.G628.25 Capsicum annuum HOM05D000018 ORTHO05D007339 6.8e-19 97.8 92 50.0
Solyc06g069900.3 Solanum lycopersicum HOM05D000018 ORTHO05D007339 6.8e-19 97.8 92 50.0
Peaxi162Scf00103g00112 Petunia axillaris HOM05D000018 ORTHO05D007339 8.8e-19 97.4 92 50.0
Peaxi162Scf00013g00226 Petunia axillaris HOM05D000018 ORTHO05D007339 1.2e-18 97.1 92 50.0
PSO017G0868 Papaver somniferum HOM05D000018 ORTHO05D007339 5.7e-18 94.7 108 46.3
PSO478G0669 Papaver somniferum HOM05D000018 ORTHO05D007339 7.5e-18 94.4 108 46.3
Nitab4.5_0002257g0160 Nicotiana tabacum HOM05D000018 ORTHO05D007339 1.3e-17 93.6 71 54.9
Actinidia19060 Actinidia chinensis HOM05D000259 ORTHO05D000155 2.2e-17 92.8 96 46.9
Actinidia19061 Actinidia chinensis HOM05D000018 ORTHO05D007339 2.2e-17 92.8 96 46.9
Nitab4.5_0004103g0040 Nicotiana tabacum HOM05D000018 ORTHO05D007339 4.8e-17 91.7 71 54.9
Peaxi162Scf00103g00008 Petunia axillaris HOM05D000018 ORTHO05D007339 6.3e-17 91.3 91 46.2
CAN.G407.119 Capsicum annuum HOM05D000018 ORTHO05D007339 1.1e-16 90.5 83 47.0
Peaxi162Scf00652g00036 Petunia axillaris HOM05D000018 ORTHO05D007339 5.3e-16 88.2 92 47.8
Nitab4.5_0000026g0070 Nicotiana tabacum HOM05D000018 ORTHO05D007339 9.1e-16 87.4 88 48.9
Peaxi162Scf00712g00314 Petunia axillaris HOM05D000018 ORTHO05D007339 9.1e-16 87.4 84 50.0
PGSC0003DMG400000596 Solanum tuberosum HOM05D000018 ORTHO05D007339 1.2e-15 87.0 83 45.8
Peaxi162Scf00175g00326 Petunia axillaris HOM05D000018 ORTHO05D007339 2.0e-15 86.3 84 48.8
Peaxi162Scf00712g00315 Petunia axillaris HOM05D000018 ORTHO05D007339 2.0e-15 86.3 83 49.4
Peaxi162Scf00712g00059 Petunia axillaris HOM05D000018 ORTHO05D007339 2.7e-15 85.9 84 48.8
Peaxi162Scf00712g00513 Petunia axillaris HOM05D000018 ORTHO05D007339 2.7e-15 85.9 84 48.8
Peaxi162Scf00712g00414 Petunia axillaris HOM05D000018 ORTHO05D007339 5.9e-15 84.7 84 47.6
Peaxi162Scf00712g00611 Petunia axillaris HOM05D000018 ORTHO05D007339 1.0e-14 84.0 65 58.5
Nitab4.5_0015044g0010 Nicotiana tabacum HOM05D000018 ORTHO05D007339 1.7e-14 83.2 88 47.7
Solyc03g116290.3 Solanum lycopersicum HOM05D000018 ORTHO05D007339 1.7e-14 83.2 83 43.4
Sopen03g035240 Solanum pennellii HOM05D000018 ORTHO05D007339 1.7e-14 83.2 83 43.4
Peaxi162Scf00274g00750 Petunia axillaris HOM05D000018 ORTHO05D007339 2.9e-14 82.4 86 41.9
Peaxi162Scf00712g00319 Petunia axillaris HOM05D000018 ORTHO05D007339 3.8e-14 82.0 65 56.9
Peaxi162Scf00299g00842 Petunia axillaris HOM05D000018 ORTHO05D007339 6.5e-14 81.3 83 48.2
Peaxi162Scf00299g00844 Petunia axillaris HOM05D000018 ORTHO05D007339 6.5e-14 81.3 83 48.2
SEGI_02808 Sequoiadendron giganteum HOM05D000018 ORTHO05D007339 1.5e-13 80.1 106 43.4
Nitab4.5_0004103g0060 Nicotiana tabacum HOM05D000018 ORTHO05D007339 3.6e-12 75.5 66 56.1
Nitab4.5_0000269g0040 Nicotiana tabacum HOM05D002208 ORTHO05D002333 3.1e-08 62.4 54 51.9
SMO118G0353 Selaginella moellendorffii HOM05D000018 ORTHO05D007339 4.1e-08 62.0 71 49.3
Peaxi162Scf00712g00511 Petunia axillaris HOM05D000018 ORTHO05D007339 2.7e-07 59.3 84 39.3
SMO340G0269 Selaginella moellendorffii HOM05D000018 ORTHO05D015303 2.9e-06 55.8 92 37.0
CARHR088310 Cardamine hirsuta HOM05D000018 ORTHO05D000872 8.6e-06 54.3 106 35.8
SMO235G0052 Selaginella moellendorffii HOM05D000018 ORTHO05D015303 8.6e-06 54.3 110 35.5
SMO347G0139 Selaginella moellendorffii HOM05D000018 ORTHO05D015303 8.6e-06 54.3 110 35.5


User provided reference genes

Program Settings