Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 8.8e-98 360.5 215 100.0
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 2.0e-17 93.6 156 44.2
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.8e-13 80.5 155 34.8
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 5.1e-13 79.0 189 33.3
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 1.1e-12 77.8 144 43.8
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 3.3e-12 76.3 130 42.3
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 1.3e-11 74.3 205 34.6
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.3e-11 74.3 137 45.3
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 3.6e-11 72.8 177 36.7
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.6e-11 72.8 177 36.7
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.6e-11 72.8 175 29.7
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-10 71.2 137 43.8
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-10 70.9 159 41.5
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 1.4e-10 70.9 137 42.3
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 1.4e-10 70.9 158 41.8
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.8e-10 70.5 208 38.5
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-10 70.1 159 40.9
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.1e-10 69.7 124 37.1
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 9.0e-10 68.2 169 37.9
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.2e-09 67.8 130 42.3
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 1.5e-09 67.4 163 38.7
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.0e-09 67.0 152 38.2
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 4.5e-09 65.9 137 43.8
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-08 64.3 125 42.4
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 2.2e-08 63.5 125 42.4
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.9e-08 63.2 152 36.2
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 2.9e-08 63.2 143 43.4
Dinv13238 Davidia involucrata HOM05D004728 ORTHO05D002375 3.8e-08 62.8 136 35.3
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 3.8e-08 62.8 197 32.5
Oeu049688.1 Olea europaea HOM05D004728 ORTHO05D002375 6.4e-08 62.0 116 47.4
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 8.4e-08 61.6 72 63.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 2.4e-07 60.1 135 40.7
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-07 60.1 115 40.9
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.4e-07 60.1 136 40.4
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 3.2e-07 59.7 146 37.0
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 3.2e-07 59.7 191 33.5
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 3.2e-07 59.7 129 45.7
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 3.2e-07 59.7 136 43.4
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.5e-07 58.9 116 30.2
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.5e-07 58.9 116 30.2
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.5e-07 58.9 147 29.3
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 5.5e-07 58.9 183 26.2
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 9.3e-07 58.2 140 25.0
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.2e-06 57.8 104 45.2
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 148 36.5
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 1.6e-06 57.4 208 33.2
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.1e-06 57.0 132 39.4
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.1e-06 57.0 103 46.6
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.7e-06 56.6 122 43.4
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.7e-06 56.6 129 44.2
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.7e-06 56.6 174 36.2
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 6.0e-06 55.5 136 39.7
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 6.0e-06 55.5 183 36.6
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 7.9e-06 55.1 215 28.4


User provided reference genes

Program Settings