Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 4.8e-112 407.9 215 100.0
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 3.5e-70 268.9 213 68.1
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 4.5e-70 268.5 213 68.1
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.7e-67 259.2 213 66.7
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 6.8e-66 254.6 199 66.3
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.6e-65 252.7 212 64.6
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.3e-64 250.4 213 65.7
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 8.3e-64 247.7 212 63.2
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 8.3e-64 247.7 213 64.8
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.4e-63 246.9 213 64.8
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 7.0e-63 244.6 212 60.4
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 3.5e-62 242.3 212 59.4
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 7.7e-62 241.1 212 60.4
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 7.7e-62 241.1 215 58.6
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 6.6e-61 238.0 211 60.7
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 3.3e-60 235.7 213 60.6
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.2e-59 233.8 212 61.8
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 6.1e-59 231.5 210 58.1
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.4e-58 230.3 217 59.0
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 4.4e-57 225.3 202 60.9
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 2.9e-56 222.6 212 56.6
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.9e-56 222.6 212 56.1
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 3.7e-56 222.2 210 56.7
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 6.4e-56 221.5 214 57.0
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 8.3e-56 221.1 213 55.9
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.8e-55 219.9 218 56.0
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 7.0e-55 218.0 203 58.1
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.2e-54 217.2 215 55.3
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 3.5e-54 215.7 214 56.5
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 3.5e-54 215.7 215 55.3
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 3.5e-54 215.7 212 54.7
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 3.0e-53 212.6 212 55.2
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 5.0e-53 211.8 211 55.0
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 6.6e-53 211.5 210 56.2
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.5e-52 210.3 210 55.7
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 9.5e-52 207.6 214 51.4
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.2e-51 207.2 212 52.4
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 1.2e-51 207.2 212 53.8
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 2.1e-51 206.5 212 53.3
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 6.2e-51 204.9 213 52.1
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.4e-50 203.8 214 52.8
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 1.4e-50 203.8 206 53.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.8e-50 203.4 212 53.3
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 4.0e-50 202.2 216 52.3
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 5.2e-50 201.8 213 51.2
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 5.2e-50 201.8 212 52.8
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 6.8e-50 201.4 214 53.7
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 8.9e-50 201.1 212 52.8
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 8.9e-50 201.1 214 52.8
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 8.9e-50 201.1 214 51.4
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.0e-49 199.9 212 50.9
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.0e-49 199.9 212 50.5
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 2.6e-49 199.5 216 51.9
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 3.4e-49 199.1 212 51.4
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 7.5e-49 198.0 216 50.0
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 9.8e-49 197.6 213 51.6
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.7e-48 196.8 214 51.9
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.7e-48 196.8 209 51.2
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 2.2e-48 196.4 213 52.1
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 2.2e-48 196.4 214 52.3
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.2e-48 196.4 215 54.0
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 3.7e-48 195.7 220 52.3
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.9e-48 195.3 215 51.2
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 6.4e-48 194.9 219 49.8
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 8.3e-48 194.5 214 51.9
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 2.4e-47 193.0 212 50.0
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 9.2e-47 191.0 213 50.2
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 9.2e-47 191.0 215 49.3
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 1.2e-46 190.7 212 51.4
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 2.7e-46 189.5 212 50.0
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 3.5e-46 189.1 215 48.8
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 7.8e-46 188.0 213 49.8
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 7.8e-46 188.0 202 50.0
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.0e-45 187.6 213 50.7
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.3e-45 187.2 215 48.4
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.7e-45 186.8 212 49.1
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 3.0e-45 186.0 213 49.8
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 3.0e-45 186.0 213 48.4
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 3.9e-45 185.7 213 47.9
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 1.1e-44 184.1 216 50.0
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 1.9e-44 183.3 213 49.3
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.9e-44 183.3 213 50.2
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 3.3e-44 182.6 212 47.2
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 3.3e-44 182.6 214 48.1
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 3.3e-44 182.6 211 49.8
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 9.5e-44 181.0 200 48.5
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.2e-43 180.6 213 47.4
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 4.7e-43 178.7 203 49.8
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 3.1e-42 176.0 212 46.2
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.0e-42 175.6 213 48.8
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 5.2e-42 175.3 213 49.8
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 5.2e-42 175.3 183 51.4
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 1.5e-41 173.7 210 47.6
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 2.0e-41 173.3 200 48.5
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 4.4e-41 172.2 183 51.9
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 7.5e-41 171.4 197 49.7
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 7.5e-41 171.4 154 59.1
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 9.8e-41 171.0 216 46.3
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 9.8e-41 171.0 210 46.2
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 9.8e-41 171.0 227 45.4
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 1.7e-40 170.2 197 49.2
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.7e-40 170.2 208 47.1
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 1.7e-40 170.2 210 46.2
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.7e-40 170.2 216 45.4
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 2.2e-40 169.9 218 46.8
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 2.9e-40 169.5 195 48.2
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 6.4e-40 168.3 218 46.3
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 1.1e-39 167.5 210 47.1
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 1.1e-39 167.5 199 48.7
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 1.1e-39 167.5 199 48.7
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.9e-39 166.8 199 48.2
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.9e-39 166.8 219 46.1
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.9e-39 166.8 213 46.0
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 2.4e-39 166.4 199 48.2
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 2.4e-39 166.4 213 46.0
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 5.4e-39 165.2 212 42.9
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 7.1e-39 164.9 199 46.7
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 9.2e-39 164.5 218 43.6
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.2e-38 164.1 195 48.2
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 1.6e-38 163.7 216 44.4
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 1.7e-37 160.2 191 48.2
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 1.7e-37 160.2 195 48.2
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 5.1e-37 158.7 213 45.5
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 8.6e-37 157.9 199 47.7
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.1e-36 157.5 213 42.3
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 5.6e-36 155.2 218 44.5
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 5.6e-36 155.2 216 44.9
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 7.3e-36 154.8 215 41.9
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 9.5e-36 154.5 213 42.3
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 9.5e-36 154.5 213 43.7
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 1.6e-35 153.7 209 42.1
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 1.1e-34 151.0 210 42.4
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.8e-34 150.2 214 43.5
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 3.1e-34 149.4 165 49.1
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 2.0e-33 146.7 209 42.1
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.4e-33 146.0 201 45.3
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.7e-32 143.7 216 42.1
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.4e-31 140.6 217 40.6
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 3.2e-31 139.4 139 54.0
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 3.2e-31 139.4 142 52.8
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 9.2e-31 137.9 207 42.0
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 9.2e-31 137.9 209 40.7
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.2e-30 137.5 188 43.6
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 3.8e-24 115.9 211 36.5
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 3.2e-23 112.8 118 50.0
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 5.4e-23 112.1 223 34.1
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 9.3e-23 111.3 143 45.5
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 3.9e-21 105.9 226 31.9
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 4.3e-20 102.4 205 34.1
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.3e-20 101.7 137 44.5
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 4.8e-19 99.0 115 46.1
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 2.4e-07 60.1 105 39.0


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