Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 0.0e+00 1396.3 747 100.0
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 8.7e-161 571.6 751 48.1
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.0e-154 548.9 737 45.9
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 4.9e-148 529.3 758 45.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 1.9e-147 527.3 746 45.6
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 4.2e-139 499.6 743 44.5
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 9.4e-139 498.4 388 66.2
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 6.7e-137 492.3 579 50.4
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 6.7e-137 492.3 781 42.4
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.0e-136 490.7 757 42.4
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 2.0e-136 490.7 371 66.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.2e-135 487.3 783 42.3
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.4e-134 484.6 326 73.3
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 1.4e-134 484.6 441 59.0
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.8e-134 484.2 734 42.5
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 2.4e-134 483.8 375 64.3
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 1.5e-133 481.1 673 46.2
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 2.6e-133 480.3 786 41.5
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.3e-132 478.0 397 62.0
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.3e-132 478.0 372 65.3
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 3.8e-132 476.5 655 46.9
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 6.5e-132 475.7 397 62.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.2e-131 473.4 402 60.9
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 4.2e-131 473.0 797 41.4
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 4.2e-131 473.0 825 41.1
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 4.2e-131 473.0 596 45.8
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.2e-130 471.5 609 47.0
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.2e-130 471.5 372 64.8
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.7e-130 470.3 402 60.7
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 2.3e-129 467.2 743 42.1
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 3.0e-129 466.8 376 62.0
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 3.9e-129 466.5 369 64.5
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 6.7e-129 465.7 774 41.1
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 4.4e-128 463.0 753 40.0
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 9.7e-128 461.8 669 43.8
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.2e-127 460.7 760 43.6
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 5.3e-126 456.1 381 63.0
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 5.0e-124 449.5 381 62.2
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 6.5e-124 449.1 379 61.2
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 8.5e-124 448.7 376 62.0
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.5e-123 447.2 376 61.7
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.5e-123 447.2 380 61.8
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 4.2e-123 446.4 377 61.5
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 4.2e-123 446.4 368 60.9
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.1e-122 444.1 376 61.4
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 2.1e-122 444.1 750 39.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.4e-121 441.4 331 65.9
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.8e-121 441.0 374 60.7
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 3.9e-121 439.9 365 60.8
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.0e-120 437.6 678 41.6
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 3.3e-120 436.8 578 44.5
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 6.3e-119 432.6 622 43.7
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 3.1e-118 430.3 583 43.9
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 4.1e-118 429.9 580 45.0
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 5.3e-118 429.5 372 59.4
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 7.0e-118 429.1 372 60.5
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.6e-117 427.9 586 43.3
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.3e-116 424.9 743 39.7
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.1e-114 417.5 376 57.4
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.1e-114 416.0 324 62.0
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.4e-113 414.8 326 62.6
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 3.0e-113 413.7 284 70.4
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 8.5e-108 395.6 326 61.7
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 3.2e-107 393.7 358 57.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 7.2e-107 392.5 641 40.2
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.2e-106 391.7 339 58.7
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.0e-105 388.7 320 61.9
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.8e-105 387.9 377 57.0
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 8.8e-105 385.6 358 58.4
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.0e-104 384.4 321 61.1
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 4.4e-104 383.3 322 60.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.6e-101 374.8 370 54.1
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 4.5e-101 373.2 321 58.6
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 7.7e-101 372.5 321 58.6
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.1e-98 364.4 370 53.0
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.0e-97 360.1 697 38.9
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 7.5e-96 355.9 264 66.3
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 7.5e-96 355.9 264 66.3
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.3e-95 355.1 322 56.2
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 1.7e-95 354.8 264 65.9
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 1.7e-95 354.8 264 65.9
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.1e-94 352.1 353 52.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.5e-93 346.7 289 60.9
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.8e-90 337.4 341 54.3
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.4e-89 335.1 202 78.7
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.5e-88 331.6 208 73.6
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 2.6e-88 330.9 368 48.6
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.7e-87 327.0 286 59.8
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 5.4e-86 323.2 363 51.0
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.2e-85 322.0 497 40.8
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 6.0e-85 319.7 233 67.0
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.5e-80 305.1 287 56.4
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 7.8e-77 292.7 309 55.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 9.2e-70 269.2 381 42.8
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.9e-68 263.8 254 51.6
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.3e-67 260.4 258 53.1
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.0e-60 239.2 272 51.5
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 4.0e-57 227.3 238 49.6
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-54 219.2 117 84.6
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.6e-53 215.3 252 43.7
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 3.5e-53 214.2 192 53.6
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 2.1e-50 204.9 119 79.8
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 2.4e-46 191.4 588 29.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.3e-44 185.7 217 47.9
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.6e-42 178.7 172 58.1
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 9.0e-41 172.9 341 38.4
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.5e-40 172.2 169 58.6
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 2.2e-31 141.7 166 49.4
Oeu032321.1 Olea europaea HOM05D006714 ORTHO05D008103 3.3e-11 74.7 231 27.7


User provided reference genes

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