Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 4.0e-63 244.6 122 100.0
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 3.1e-31 138.7 102 66.7
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 5.2e-31 137.9 113 65.5
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 3.4e-30 135.2 106 65.1
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 5.8e-30 134.4 103 60.2
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 1.3e-29 133.3 103 59.2
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 4.2e-28 128.3 106 63.2
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 5.4e-28 127.9 100 60.0
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 7.1e-28 127.5 107 60.7
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 1.2e-27 126.7 106 57.5
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.6e-27 126.3 106 57.5
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 1.6e-27 126.3 98 63.3
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.6e-27 126.3 100 60.0
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 2.7e-27 125.6 106 56.6
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 2.7e-27 125.6 78 75.6
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.0e-26 123.6 100 59.0
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 1.0e-26 123.6 97 61.9
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 1.0e-26 123.6 93 65.6
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 1.3e-26 123.2 102 58.8
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 2.3e-26 122.5 101 57.4
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 3.9e-26 121.7 96 62.5
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 6.6e-26 120.9 100 57.0
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 1.1e-25 120.2 80 67.5
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 1.5e-25 119.8 98 60.2
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 1.5e-25 119.8 78 67.9
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 1.9e-25 119.4 99 60.6
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 2.5e-25 119.0 109 59.6
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 3.3e-25 118.6 97 61.9
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 9.6e-25 117.1 99 57.6
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 9.6e-25 117.1 94 62.8
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 9.6e-25 117.1 96 59.4
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 1.3e-24 116.7 98 59.2
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 1.3e-24 116.7 107 55.1
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 1.3e-24 116.7 104 57.7
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 1.6e-24 116.3 97 59.8
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 2.1e-24 115.9 99 58.6
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 2.8e-24 115.5 105 55.2
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 2.8e-24 115.5 84 63.1
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 3.6e-24 115.2 93 58.1
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 3.6e-24 115.2 83 59.0
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.6e-24 115.2 96 55.2
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 3.6e-24 115.2 110 56.4
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 3.6e-24 115.2 84 65.5
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 6.2e-24 114.4 106 59.4
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 6.2e-24 114.4 100 61.0
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 8.1e-24 114.0 95 61.1
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 8.1e-24 114.0 95 60.0
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 8.1e-24 114.0 96 58.3
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 8.1e-24 114.0 100 58.0
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 1.1e-23 113.6 95 54.7
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 1.1e-23 113.6 91 59.3
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 1.4e-23 113.2 103 55.3
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 1.4e-23 113.2 88 59.1
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 3.1e-23 112.1 94 55.3
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 4.0e-23 111.7 102 56.9
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 5.3e-23 111.3 93 57.0
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 6.9e-23 110.9 101 54.5
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 6.9e-23 110.9 88 58.0
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 9.0e-23 110.5 105 52.4
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 1.2e-22 110.2 85 60.0
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 1.2e-22 110.2 93 53.8
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 1.5e-22 109.8 98 58.2
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 1.5e-22 109.8 73 68.5
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 1.5e-22 109.8 102 55.9
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 1.5e-22 109.8 96 58.3
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 2.0e-22 109.4 97 54.6
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 2.0e-22 109.4 104 52.9
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 2.0e-22 109.4 96 56.2
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 2.6e-22 109.0 97 55.7
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 3.4e-22 108.6 97 52.6
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 4.4e-22 108.2 77 63.6
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 5.8e-22 107.8 97 53.6
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 5.8e-22 107.8 106 51.9
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 9.9e-22 107.1 77 66.2
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 1.3e-21 106.7 102 54.9
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 2.2e-21 105.9 107 53.3
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 2.9e-21 105.5 88 54.5
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 3.8e-21 105.1 77 63.6
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 3.8e-21 105.1 89 59.6
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 3.8e-21 105.1 78 64.1
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 6.4e-21 104.4 93 53.8
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 6.4e-21 104.4 80 62.5
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 3.2e-20 102.1 101 50.5
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 4.2e-20 101.7 96 52.1
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 7.1e-20 100.9 102 52.0
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 7.1e-20 100.9 68 64.7
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 9.3e-20 100.5 79 58.2
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.6e-19 99.8 84 59.5
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 2.1e-19 99.4 105 49.5
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 1.0e-18 97.1 82 54.9
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 3.0e-18 95.5 95 53.7
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 3.9e-18 95.1 86 54.7
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 2.5e-17 92.4 87 52.9
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 5.6e-17 91.3 86 53.5
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 1.3e-16 90.1 62 62.9
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 3.6e-16 88.6 75 58.7
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 8.4e-13 77.4 81 42.0
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 2.1e-11 72.8 73 46.6
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 2.1e-11 72.8 64 57.8
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 7.9e-11 70.9 97 41.2
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 1.3e-10 70.1 86 39.5
QL02p059474 Quercus lobata HOM05D002544 ORTHO05D007856 2.3e-10 69.3 38 76.3
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 1.5e-09 66.6 79 43.0
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 1.6e-08 63.2 94 42.6


User provided reference genes

Program Settings