Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 1.2e-103 380.2 235 100.0
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 2.6e-55 219.5 215 61.9
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 4.5e-55 218.8 228 61.0
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 9.4e-53 211.1 224 58.5
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 9.4e-53 211.1 226 59.7
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.6e-52 210.3 222 58.1
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.4e-51 207.2 234 56.8
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 1.8e-51 206.8 196 62.8
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.8e-51 206.8 226 58.0
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.0e-51 206.1 196 61.7
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 5.1e-51 205.3 236 55.9
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 8.8e-51 204.5 220 57.3
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 1.1e-50 204.1 190 63.7
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.0e-50 203.4 196 60.7
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 2.6e-50 203.0 219 56.2
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 3.3e-50 202.6 197 60.4
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 5.7e-50 201.8 223 58.7
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 5.7e-50 201.8 236 56.4
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.3e-49 200.7 206 59.2
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 1.3e-49 200.7 236 55.1
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 1.7e-49 200.3 203 59.6
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.2e-49 199.9 213 57.3
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 3.7e-49 199.1 216 56.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.7e-49 199.1 222 56.3
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 3.7e-49 199.1 217 55.8
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 8.2e-49 198.0 226 57.1
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.1e-48 197.6 233 53.2
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 2.4e-48 196.4 200 57.5
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 7.0e-48 194.9 232 54.3
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.2e-47 194.1 233 53.2
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 3.5e-47 192.6 181 63.5
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 3.5e-47 192.6 223 52.9
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.3e-46 190.7 198 60.6
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 2.2e-46 189.9 207 55.6
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 5.0e-46 188.7 193 58.5
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 5.0e-46 188.7 201 58.2
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 6.5e-46 188.3 197 64.0
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.9e-45 186.8 225 55.1
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 3.2e-45 186.0 183 59.0
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 9.4e-45 184.5 238 50.4
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 1.2e-44 184.1 205 53.2
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.2e-44 184.1 206 56.8
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.2e-44 184.1 218 52.3
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.6e-44 183.7 206 53.4
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 4.7e-44 182.2 203 55.7
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.0e-43 181.0 181 58.0
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.4e-43 180.6 226 50.9
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 1.4e-43 180.6 239 48.1
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.3e-43 179.9 233 48.1
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 4.0e-43 179.1 290 46.2
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 4.0e-43 179.1 262 46.9
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 5.2e-43 178.7 208 56.2
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 6.7e-43 178.3 224 49.6
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 8.8e-43 177.9 234 47.9
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 1.1e-42 177.6 183 55.7
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.5e-42 177.2 189 58.2
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 2.0e-42 176.8 228 49.1
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.6e-42 176.4 198 55.6
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 3.3e-42 176.0 167 61.7
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 4.4e-42 175.6 219 51.1
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.7e-42 175.3 191 55.5
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 7.5e-42 174.9 188 54.8
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 9.7e-42 174.5 260 44.2
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 2.2e-41 173.3 192 54.7
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 3.7e-41 172.6 197 55.3
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.7e-41 172.6 192 54.7
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.8e-41 172.2 202 50.5
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.1e-40 171.0 218 50.5
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 1.8e-40 170.2 197 50.8
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 2.4e-40 169.9 220 47.3
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 2.4e-40 169.9 225 49.3
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 3.1e-40 169.5 201 54.7
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 4.1e-40 169.1 220 47.7
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 9.1e-40 167.9 198 52.0
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.0e-39 166.8 191 51.3
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.0e-39 166.8 192 63.0
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 3.5e-39 166.0 244 46.7
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 5.9e-39 165.2 203 48.3
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 1.3e-38 164.1 183 52.5
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.7e-38 163.7 208 49.0
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 2.2e-38 163.3 221 47.1
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 5.5e-37 158.7 197 51.3
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 1.2e-36 157.5 190 49.5
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.6e-36 157.1 181 53.6
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 1.0e-35 154.5 190 48.4
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 5.2e-35 152.1 208 48.1
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 5.2e-35 152.1 176 49.4
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.2e-34 151.0 208 45.2
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 3.4e-34 149.4 207 44.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 4.4e-34 149.1 210 46.7
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 5.7e-34 148.7 209 45.9
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 7.5e-34 148.3 191 48.7
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 7.5e-34 148.3 191 48.7
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.3e-33 147.5 207 47.8
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.3e-33 147.5 196 48.5
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.2e-33 146.7 187 49.7
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 3.7e-33 146.0 158 59.5
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 4.8e-33 145.6 192 48.4
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 4.8e-33 145.6 192 48.4
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 4.8e-33 145.6 225 53.8
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 1.8e-32 143.7 192 46.4
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.4e-32 143.3 191 55.0
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 2.4e-32 143.3 211 53.6
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 4.1e-32 142.5 187 48.1
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 5.4e-32 142.1 219 43.8
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 7.0e-32 141.7 192 47.4
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 1.0e-30 137.9 192 46.9
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 1.0e-30 137.9 205 49.8
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 1.0e-30 137.9 205 49.8
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 1.0e-30 137.9 205 49.8
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 1.0e-30 137.9 161 51.6
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 1.0e-30 137.9 219 43.4
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 2.2e-30 136.7 199 44.2
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 2.2e-30 136.7 215 51.6
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 2.9e-30 136.3 185 47.0
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 3.8e-30 136.0 203 44.3
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 5.0e-30 135.6 161 49.1
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 6.5e-30 135.2 217 42.4
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.5e-29 134.0 198 42.9
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 2.5e-29 133.3 211 52.6
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 2.3e-27 126.7 233 39.5
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 5.2e-27 125.6 103 72.8
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 3.4e-26 122.9 161 50.9
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 5.7e-26 122.1 192 55.2
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.7e-25 119.4 178 53.4
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.1e-24 117.9 127 54.3
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 2.4e-24 116.7 185 49.2
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 5.9e-23 112.1 139 51.1
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 1.9e-21 107.1 277 37.2
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.1e-20 103.6 119 53.8
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.4e-19 100.9 111 57.7
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 2.3e-19 100.1 191 38.2
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 4.0e-19 99.4 145 49.0
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 2.6e-18 96.7 184 33.7
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 7.0e-16 88.6 90 56.7
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 3.5e-15 86.3 112 53.6
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 4.6e-15 85.9 107 47.7
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 1.3e-14 84.3 101 54.5
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.3e-14 84.3 92 56.5
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.8e-11 73.9 148 36.5
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 5.2e-11 72.4 86 45.3
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 2.0e-10 70.5 63 68.3
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 2.2e-09 67.0 94 45.7
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 4.9e-09 65.9 134 31.3
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 1.9e-08 63.9 81 45.7
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 7.0e-08 62.0 76 46.1
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 9.2e-08 61.6 40 72.5
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 2.0e-07 60.5 79 43.0
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 2.0e-07 60.5 114 36.8
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 2.3e-06 57.0 43 55.8


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