Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.4e-239 831.2 414 100.0
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 4.5e-167 591.7 419 70.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.4e-165 586.6 412 69.7
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.0e-162 576.2 405 69.6
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.7e-161 573.2 417 67.4
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 9.1e-160 567.4 403 68.0
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.5e-159 565.5 386 71.0
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 4.5e-159 565.1 381 69.0
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.1e-157 560.5 412 67.0
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.1e-157 560.5 411 65.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.1e-157 560.5 395 68.9
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.5e-157 560.1 385 70.4
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.9e-157 559.7 415 68.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.2e-156 557.0 409 65.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 8.0e-156 554.3 373 70.2
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 4.4e-154 548.5 386 67.6
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 9.7e-154 547.4 389 67.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.2e-153 546.2 416 64.2
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.8e-153 545.8 411 65.0
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.8e-153 545.8 405 66.9
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.8e-152 543.1 405 66.4
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.8e-150 535.4 435 62.8
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 8.5e-150 534.3 384 66.1
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.5e-149 532.7 399 64.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.5e-149 532.7 401 62.8
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 9.4e-149 530.8 373 67.0
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 4.7e-148 528.5 413 61.7
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 6.1e-148 528.1 420 62.4
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.0e-147 527.3 408 62.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.0e-147 527.3 413 61.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.8e-147 526.6 394 63.7
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 8.8e-147 524.2 415 62.7
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.5e-146 523.5 409 63.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 5.7e-146 521.5 384 64.3
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.3e-145 520.4 426 60.1
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.7e-145 520.0 370 66.2
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 2.2e-145 519.6 398 62.1
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.8e-145 519.2 370 66.8
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.1e-144 517.3 416 61.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.4e-144 516.9 400 62.8
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.4e-144 516.9 400 62.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 4.1e-144 515.4 401 64.8
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.2e-143 513.8 416 63.7
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 4.5e-143 511.9 402 64.2
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 4.5e-143 511.9 372 63.7
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 5.9e-143 511.5 406 61.6
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.0e-142 510.8 406 61.6
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.2e-142 509.6 394 61.2
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.1e-141 507.3 418 62.7
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.5e-141 506.9 415 62.9
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 3.2e-141 505.8 407 60.0
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 4.2e-141 505.4 374 62.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 5.5e-141 505.0 402 61.2
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 9.4e-141 504.2 424 61.8
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 9.4e-141 504.2 405 61.0
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.4e-139 500.4 411 59.6
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 3.0e-139 499.2 405 59.3
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 7.5e-138 494.6 424 60.1
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 4.9e-137 491.9 407 62.2
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.2e-135 487.3 372 60.5
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.7e-135 486.1 371 60.9
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.7e-135 486.1 385 63.4
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 3.5e-135 485.7 414 61.1
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 3.5e-135 485.7 414 61.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 3.5e-135 485.7 381 62.2
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 5.9e-135 485.0 414 61.1
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 2.3e-134 483.0 403 59.8
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.9e-134 482.6 441 56.0
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.8e-134 482.3 390 62.1
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 5.0e-134 481.9 385 63.4
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.8e-132 476.1 388 58.5
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.8e-131 471.5 334 65.9
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 4.4e-130 468.8 451 55.9
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 4.9e-129 465.3 396 62.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.7e-126 456.8 420 54.5
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.8e-124 449.5 411 55.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 6.2e-124 448.4 411 56.0
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 8.0e-124 448.0 313 66.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 8.9e-123 444.5 286 72.7
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.9e-117 426.8 289 68.5
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.6e-116 422.5 395 53.4
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.2e-116 421.8 298 66.4
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.8e-115 420.2 371 55.3
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 4.9e-113 412.1 372 54.6
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.9e-110 402.5 311 60.8
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.9e-110 402.5 306 61.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 9.6e-101 371.3 296 57.1
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.3e-93 346.3 291 61.5
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.7e-89 334.0 231 68.0
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 6.9e-83 312.0 274 56.6
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.7e-81 307.4 257 58.4
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.9e-81 306.6 276 55.1
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 7.9e-79 298.5 384 44.3
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 6.7e-78 295.4 218 64.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 6.2e-76 288.9 248 57.7
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 4.5e-66 256.1 378 38.6
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 3.8e-65 253.1 204 61.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 5.5e-56 222.6 185 60.5
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.0e-54 218.4 158 68.4
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.6e-47 193.4 147 64.6
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.0e-46 191.8 396 32.8
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.2e-46 189.5 141 63.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.0e-38 165.2 135 54.8
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.8e-25 120.2 115 53.9
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 3.0e-22 110.5 105 53.3
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 2.0e-21 107.8 188 38.3
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 2.0e-21 107.8 363 28.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.4e-21 107.1 84 61.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.4e-21 107.1 354 28.0
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.7e-20 104.8 98 53.1
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 3.8e-17 93.6 412 27.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 8.6e-17 92.4 384 25.5
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 9.5e-16 89.0 67 67.2
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 4.4e-13 80.1 66 50.0
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.7e-13 79.7 111 39.6
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.4e-11 75.1 68 51.5
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.6e-10 71.6 81 53.1
SEGI_39013 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 8.0e-07 59.3 147 26.5
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.1e-06 58.9 73 46.6


User provided reference genes

Program Settings