Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 8.2e-185 650.2 317 100.0
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 6.2e-116 421.4 314 67.5
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 4.0e-115 418.7 319 66.1
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.5e-114 416.8 310 64.8
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 7.5e-114 414.5 310 64.2
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 6.4e-113 411.4 312 63.8
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 9.2e-112 407.5 312 64.7
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 7.8e-111 404.4 304 65.1
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 1.3e-110 403.7 311 64.3
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 2.8e-108 396.0 311 61.7
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 5.2e-107 391.7 315 63.8
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 3.8e-105 385.6 289 65.1
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 3.2e-104 382.5 294 65.0
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 8.6e-102 374.4 300 62.7
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.1e-101 374.0 306 61.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.4e-99 366.3 288 62.2
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 7.6e-98 361.3 318 59.1
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 4.2e-96 355.5 318 58.8
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.3e-92 344.0 301 58.8
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 2.8e-92 342.8 305 57.4
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 1.8e-91 340.1 285 58.9
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 4.0e-91 339.0 280 58.2
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 1.2e-90 337.4 315 55.2
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 2.0e-90 336.7 289 57.1
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.7e-89 333.6 314 56.7
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 8.4e-89 331.3 305 56.4
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.4e-88 330.5 320 52.5
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 3.2e-88 329.3 287 55.4
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 9.3e-88 327.8 310 55.5
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 1.6e-87 327.0 302 55.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 2.7e-87 326.2 294 55.8
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 6.0e-87 325.1 292 57.5
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.8e-86 323.6 303 54.8
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.3e-86 323.2 280 56.1
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 3.0e-86 322.8 308 54.2
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 6.7e-86 321.6 286 55.9
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.5e-85 320.5 306 54.2
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 2.5e-85 319.7 314 50.3
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.3e-84 317.4 297 55.9
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 6.2e-84 315.1 316 54.4
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 6.2e-84 315.1 280 56.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.1e-83 314.3 304 53.3
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.4e-83 313.9 304 53.0
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 1.4e-83 313.9 303 53.5
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 5.3e-83 312.0 304 53.3
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.5e-82 310.5 318 56.3
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 2.9e-81 306.2 289 53.6
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.9e-81 305.4 289 53.6
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 1.1e-80 304.3 302 53.6
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 4.2e-80 302.4 304 51.6
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 7.1e-80 301.6 296 52.7
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 9.3e-80 301.2 300 51.0
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.2e-79 300.8 289 52.9
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 7.9e-79 298.1 294 54.4
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 7.4e-77 291.6 314 50.3
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 7.4e-77 291.6 304 48.7
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 3.7e-76 289.3 303 50.8
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.3e-73 280.8 313 49.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 2.5e-72 276.6 218 60.6
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.3e-69 266.2 262 55.3
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 3.3e-69 266.2 303 48.8
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 2.2e-57 226.9 238 50.0
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 3.3e-53 213.0 287 42.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 1.5e-50 204.1 175 60.6
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 6.1e-47 192.2 162 58.6
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 1.4e-43 181.0 188 51.6
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 2.3e-38 163.7 118 70.3
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 2.0e-34 150.6 215 42.3
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.2e-24 116.7 84 70.2
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.3e-22 110.5 132 43.9
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 1.7e-20 104.4 105 48.6
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 6.3e-20 102.4 107 56.1
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 4.1e-19 99.8 301 34.6
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.6e-13 80.5 59 69.5


User provided reference genes

Program Settings