Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-57 226.1 108 100.0
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 5.3e-51 204.1 96 100.0
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.1e-32 143.3 87 74.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 3.0e-30 135.2 74 75.7
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.1e-30 134.4 75 73.3
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 6.7e-30 134.0 70 81.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.3e-29 131.3 73 76.7
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 5.7e-29 131.0 69 81.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 5.7e-29 131.0 70 80.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 9.7e-29 130.2 75 72.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 9.7e-29 130.2 70 75.7
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.3e-28 129.8 74 74.3
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.3e-28 129.8 70 75.7
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.7e-28 129.4 70 78.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.2e-28 129.0 70 77.1
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.8e-28 128.6 74 75.7
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.7e-28 128.3 70 77.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.7e-28 128.3 70 77.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 3.7e-28 128.3 70 77.1
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 3.7e-28 128.3 70 75.7
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.8e-28 127.9 70 72.9
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 4.8e-28 127.9 71 73.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 4.8e-28 127.9 74 71.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 6.3e-28 127.5 70 78.6
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.3e-28 127.5 70 74.3
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.3e-28 127.5 70 74.3
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 6.3e-28 127.5 70 77.1
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 8.2e-28 127.1 69 76.8
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.1e-27 126.7 70 72.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.8e-27 125.9 70 71.4
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.8e-27 125.9 76 63.2
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.4e-27 125.6 70 72.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.4e-27 125.6 69 73.9
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.1e-27 125.2 70 74.3
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.1e-27 125.2 70 72.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.1e-27 125.2 70 72.9
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 5.3e-27 124.4 70 72.9
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 9.1e-27 123.6 70 72.9
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.2e-26 123.2 69 73.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.2e-26 123.2 70 71.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.2e-26 123.2 70 70.0
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.5e-26 122.9 70 74.3
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.5e-26 122.9 70 70.0
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.5e-26 122.9 74 67.6
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.5e-26 122.9 70 72.9
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.5e-26 122.9 70 72.9
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.0e-26 122.5 70 70.0
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.6e-26 122.1 70 72.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 4.5e-26 121.3 74 66.2
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 5.9e-26 120.9 70 68.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 7.7e-26 120.6 70 68.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.0e-25 120.2 69 68.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.3e-25 119.8 70 68.6
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.3e-25 119.8 76 63.2
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.2e-25 119.0 70 67.1
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.2e-25 119.0 73 64.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.1e-24 116.7 70 68.6
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.4e-24 116.3 70 70.0
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-24 115.9 70 71.4
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.9e-24 115.9 70 67.1
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 5.5e-24 114.4 70 71.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 7.2e-24 114.0 69 68.1
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.4e-24 113.6 70 67.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.2e-23 113.2 70 65.7
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 6.3e-20 100.9 116 43.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 5.9e-18 94.4 49 71.4
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.9e-18 94.4 49 71.4
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.9e-18 94.4 49 71.4
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.5e-16 87.8 49 77.6
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.2e-16 87.4 53 62.3
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-14 83.2 75 42.7
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.2e-14 81.3 75 41.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.1e-13 80.1 76 43.4
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.3e-12 76.6 53 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.2e-10 70.1 78 39.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.3e-09 66.6 70 48.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 8.5e-09 63.9 92 37.0


User provided reference genes

Program Settings