Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 8.2e-235 816.6 397 100.0
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 7.9e-169 597.4 401 71.1
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 3.3e-167 592.0 393 72.3
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 4.3e-167 591.7 396 69.7
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.3e-166 590.1 401 70.8
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.8e-166 589.0 401 70.6
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.9e-165 584.3 397 68.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 7.6e-164 580.9 399 67.7
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.3e-163 580.1 397 68.8
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 6.4e-163 577.8 396 69.4
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 3.2e-162 575.5 400 68.5
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 2.1e-161 572.8 437 64.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 3.5e-161 572.0 398 67.8
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.1e-159 567.0 391 68.0
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 7.4e-159 564.3 401 66.8
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 7.4e-159 564.3 398 68.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.7e-158 562.0 398 68.8
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.1e-157 560.5 398 66.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.4e-157 560.1 397 66.0
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.8e-157 559.7 402 67.9
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.8e-157 559.7 390 68.7
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 9.0e-157 557.4 399 67.7
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.5e-156 556.6 400 65.5
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 4.5e-156 555.1 402 65.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 2.9e-155 552.4 397 65.7
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 3.8e-155 552.0 382 67.3
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.8e-155 552.0 400 64.0
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 4.2e-154 548.5 417 63.5
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 5.5e-154 548.1 397 63.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.6e-153 546.6 414 64.0
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 3.5e-153 545.4 399 64.9
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.8e-152 543.1 399 63.2
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.3e-152 542.7 404 64.1
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 6.7e-152 541.2 390 64.9
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.5e-151 539.3 399 65.9
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 4.3e-151 538.5 400 64.5
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.4e-151 537.7 399 62.4
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.7e-151 537.3 399 62.4
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.3e-150 537.0 393 64.4
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.3e-150 537.0 389 65.3
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 2.8e-150 535.8 397 65.0
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 5.3e-149 531.6 396 63.1
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 4.5e-148 528.5 369 67.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 5.9e-148 528.1 409 62.1
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.3e-147 526.9 410 62.4
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 2.9e-147 525.8 456 59.6
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 2.9e-147 525.8 368 65.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.8e-147 525.4 399 63.7
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.0e-147 525.0 383 66.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 5.0e-147 525.0 397 63.2
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 6.5e-147 524.6 394 62.7
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 8.5e-147 524.2 426 59.9
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 8.5e-147 524.2 399 61.2
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.4e-146 523.5 400 61.2
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.2e-146 521.9 391 62.7
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 5.5e-146 521.5 400 61.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.2e-145 520.4 353 69.4
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.2e-145 520.4 400 64.0
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.2e-145 520.4 402 61.7
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.6e-145 520.0 394 66.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 3.9e-144 515.4 382 62.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 5.1e-144 515.0 400 61.0
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 5.1e-144 515.0 399 60.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 5.1e-144 515.0 462 56.9
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 6.7e-144 514.6 385 62.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 6.7e-144 514.6 425 61.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 8.8e-144 514.2 385 62.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 8.8e-144 514.2 385 62.3
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 5.7e-143 511.5 374 63.1
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 6.9e-141 504.6 414 60.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.2e-139 499.6 410 58.5
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 2.2e-139 499.6 408 59.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 3.2e-138 495.7 401 59.9
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.2e-138 494.6 357 66.4
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.0e-136 489.2 408 60.3
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.6e-132 476.1 351 64.4
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 3.2e-130 469.2 430 55.3
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.7e-126 455.7 439 54.2
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 4.8e-126 455.3 354 58.8
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.1e-122 444.1 340 64.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.2e-121 440.7 399 55.4
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.7e-118 430.3 288 69.8
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.8e-118 429.5 353 58.4
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.8e-118 429.5 351 57.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.6e-116 423.7 337 57.9
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.0e-112 411.0 408 54.2
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 7.5e-111 404.8 306 61.8
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.6e-108 397.1 395 50.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 3.0e-104 382.9 346 55.5
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.2e-97 360.9 253 68.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.1e-90 337.8 402 43.0
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.9e-90 337.0 248 66.5
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.3e-90 335.9 212 71.2
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 4.7e-89 332.4 336 47.0
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 8.3e-86 321.6 248 62.1
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 1.3e-83 314.3 414 45.7
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 8.6e-83 311.6 392 42.1
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.6e-79 298.5 406 42.1
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.3e-78 295.0 408 41.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 4.0e-72 276.2 209 62.2
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.2e-71 274.6 391 43.0
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 4.4e-71 272.7 395 40.3
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 7.1e-69 265.4 178 67.4
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.3e-59 234.6 185 60.5
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.9e-58 230.7 221 53.8
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 6.2e-57 225.7 212 54.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 2.4e-53 213.8 203 52.7
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 9.3e-45 185.3 137 64.2
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-43 181.8 294 37.4
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.9e-42 177.6 296 38.5
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.0e-39 167.5 131 59.5
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 5.0e-38 162.9 120 61.7
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.1e-36 157.5 97 72.2
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.3e-30 138.3 136 48.5
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 4.2e-29 133.3 107 57.9
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.5e-23 114.8 124 49.2
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 9.4e-21 105.5 107 50.5
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 3.1e-16 90.5 88 51.1
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.0e-11 73.6 117 39.3
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 8.2e-09 65.9 42 71.4


User provided reference genes

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