Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.0e-88 328.6 172 100.0
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.5e-71 273.1 163 83.4
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 1.5e-71 273.1 168 81.5
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 1.2e-70 270.0 169 79.9
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 1.6e-70 269.6 169 81.1
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.1e-70 269.2 170 79.4
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 6.2e-70 267.7 170 78.8
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 6.2e-70 267.7 170 79.4
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.1e-69 266.9 169 79.3
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 1.1e-69 266.9 167 79.6
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 1.4e-69 266.5 166 80.7
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.8e-69 266.2 170 81.2
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 3.1e-69 265.4 167 80.2
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 3.1e-69 265.4 171 77.2
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 8.9e-69 263.8 161 80.1
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 1.5e-68 263.1 169 77.5
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 2.6e-68 262.3 171 76.0
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 2.6e-68 262.3 162 82.7
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 7.6e-68 260.8 170 77.6
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.3e-67 260.0 167 79.0
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.7e-67 259.6 167 77.8
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 2.9e-67 258.8 163 79.8
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 2.9e-67 258.8 169 76.9
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.9e-67 258.8 168 76.2
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 3.8e-67 258.5 166 79.5
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 3.8e-67 258.5 171 78.9
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 4.9e-67 258.1 171 75.4
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 6.4e-67 257.7 167 77.8
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 8.4e-67 257.3 170 75.9
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.1e-66 256.9 160 78.8
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.1e-66 256.9 159 80.5
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 1.9e-66 256.1 161 78.9
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.9e-66 256.1 159 80.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 1.9e-66 256.1 164 78.0
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 1.9e-66 256.1 169 75.7
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 2.4e-66 255.8 165 78.2
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 2.4e-66 255.8 169 76.3
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 4.1e-66 255.0 167 80.2
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 5.4e-66 254.6 158 78.5
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 7.1e-66 254.2 170 74.7
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 1.2e-65 253.4 170 75.9
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.2e-65 253.4 161 77.0
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.6e-65 253.1 161 78.9
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 2.7e-65 252.3 160 78.1
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 3.5e-65 251.9 172 73.8
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.6e-65 251.5 160 78.1
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 4.6e-65 251.5 169 74.0
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 4.6e-65 251.5 171 76.0
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 6.0e-65 251.1 174 74.1
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 1.0e-64 250.4 161 75.8
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 1.7e-64 249.6 164 76.8
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 2.3e-64 249.2 161 76.4
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 3.0e-64 248.8 167 75.4
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 3.9e-64 248.4 160 79.4
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 6.6e-64 247.7 161 75.8
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 6.6e-64 247.7 176 73.9
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.6e-64 247.3 161 76.4
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 8.6e-64 247.3 170 73.5
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.1e-63 246.9 174 73.6
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 1.5e-63 246.5 161 75.2
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.9e-63 246.1 160 75.6
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.5e-63 245.7 160 76.2
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 5.6e-63 244.6 161 74.5
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 7.3e-63 244.2 155 77.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 9.6e-63 243.8 164 73.8
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 9.6e-63 243.8 165 73.9
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 1.2e-62 243.4 161 76.4
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 1.6e-62 243.0 154 78.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 2.1e-62 242.7 155 76.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 2.8e-62 242.3 161 73.9
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 3.6e-62 241.9 158 75.9
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 4.7e-62 241.5 160 73.8
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 8.1e-62 240.7 165 71.5
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 8.1e-62 240.7 168 74.4
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.1e-61 240.4 155 77.4
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 4.0e-61 238.4 154 75.3
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 4.0e-61 238.4 158 75.3
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 6.9e-61 237.7 167 73.1
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 9.0e-61 237.3 158 74.7
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.6e-60 235.7 152 74.3
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 3.4e-60 235.3 170 70.0
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 4.4e-60 235.0 155 75.5
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 7.6e-60 234.2 170 68.2
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 9.9e-60 233.8 166 71.7
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 1.3e-59 233.4 170 70.6
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 2.9e-59 232.3 162 73.5
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.1e-58 230.3 170 69.4
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 1.9e-58 229.6 155 75.5
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.9e-58 229.6 158 70.9
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 2.4e-58 229.2 152 73.0
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 3.2e-58 228.8 167 70.1
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 4.2e-58 228.4 167 70.7
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.2e-58 228.4 166 69.9
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 4.2e-58 228.4 158 72.8
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 4.2e-58 228.4 158 71.5
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 5.4e-58 228.0 163 70.6
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 5.4e-58 228.0 154 73.4
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 7.1e-58 227.6 165 67.9
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 7.1e-58 227.6 170 67.1
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 1.2e-57 226.9 158 71.5
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.6e-57 226.5 149 73.8
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 3.5e-57 225.3 197 59.9
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 4.6e-57 224.9 153 73.2
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 1.7e-56 223.0 158 69.0
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.7e-56 223.0 216 59.7
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 2.5e-55 219.2 166 66.9
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.3e-55 218.8 167 64.7
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 5.6e-55 218.0 170 67.6
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 2.1e-54 216.1 173 66.5
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.8e-54 215.7 198 60.1
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.1e-53 213.8 139 76.3
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.4e-53 213.4 166 66.3
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 9.0e-53 210.7 160 69.4
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 9.0e-53 210.7 155 66.5
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.2e-52 210.3 170 67.6
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.7e-51 206.5 171 59.1
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 3.5e-49 198.7 135 71.1
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.0e-48 197.2 162 62.3
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.8e-48 196.4 154 65.6
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.9e-48 195.3 170 60.6
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 2.5e-47 192.6 189 56.1
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 2.1e-46 189.5 130 71.5
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 2.8e-46 189.1 163 63.2
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 4.8e-46 188.3 119 75.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 6.9e-45 184.5 105 90.5
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 2.6e-44 182.6 167 59.9
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.7e-43 179.9 138 61.6
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 2.2e-43 179.5 170 58.8
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 7.1e-42 174.5 112 79.5
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 4.6e-41 171.8 153 58.2
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 7.9e-41 171.0 106 75.5
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 1.0e-40 170.6 146 62.3
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 2.8e-38 162.5 112 74.1
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 2.6e-36 156.0 154 56.5
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.4e-36 155.6 98 71.4
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.0e-35 154.1 168 51.8
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 2.9e-35 152.5 151 52.3
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 4.2e-34 148.7 105 70.5
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 6.7e-32 141.4 91 81.3
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 8.7e-32 141.0 103 71.8
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.5e-28 130.2 89 77.5
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 5.9e-28 128.3 104 64.4
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 7.2e-26 121.3 154 46.8
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.1e-25 119.8 84 67.9
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 1.7e-22 110.2 88 67.0
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 1.0e-19 100.9 175 34.9
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 2.2e-19 99.8 74 67.6
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 6.5e-19 98.2 69 69.6
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 8.5e-19 97.8 115 57.4
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.0e-16 90.9 59 76.3
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.0e-16 90.9 59 76.3
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 1.8e-16 90.1 61 68.9
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.5e-15 87.0 54 85.2
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 4.4e-15 85.5 157 36.9
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 3.1e-13 79.3 52 76.9
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 3.1e-13 79.3 197 27.9
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 2.0e-12 76.6 45 82.2
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 2.6e-12 76.3 166 33.1
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.6e-09 67.0 48 66.7


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