Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g09550 Coffea canephora HOM05D012012 ORTHO05D013530 5.7e-46 187.2 92 100.0
CSS0033942 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 8.0e-08 60.5 66 47.0
TWI31G0443 Tripterygium wilfordii HOM05D003095 ORTHO05D003517 1.0e-07 60.1 65 47.7
Glyma.06G309100 Glycine max HOM05D003095 ORTHO05D003517 3.0e-07 58.5 89 36.0
arahy.Tifrunner.gnm1.ann1.7U3W9V Arachis hypogaea HOM05D003095 ORTHO05D003517 4.0e-07 58.2 86 38.4
Rhsim11G0048900 Rhododendron simsii HOM05D003095 ORTHO05D003517 4.0e-07 58.2 72 44.4
CSS0000040 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 5.2e-07 57.8 85 36.5
CSS0048455 Camellia sinensis var. sinensis HOM05D003095 ORTHO05D003517 5.2e-07 57.8 85 36.5
Dinv42060 Davidia involucrata HOM05D003095 ORTHO05D003517 5.2e-07 57.8 65 47.7
BcaC08g45942 Brassica carinata HOM05D012012 ORTHO05D013530 6.8e-07 57.4 76 38.2
C06p37370 Brassica napus HOM05D012012 ORTHO05D013530 6.8e-07 57.4 76 38.2
AUR62011312 Chenopodium quinoa HOM05D003095 ORTHO05D003517 6.8e-07 57.4 87 40.2
Glyma.04G132300 Glycine max HOM05D003095 ORTHO05D003517 6.8e-07 57.4 89 37.1
CiPaw.05G085100 Carya illinoinensis HOM05D003095 ORTHO05D003517 8.9e-07 57.0 65 46.2
TWI79G1173 Tripterygium wilfordii HOM05D003095 ORTHO05D003517 8.9e-07 57.0 65 44.6
arahy.Tifrunner.gnm1.ann1.86RK4S Arachis hypogaea HOM05D003095 ORTHO05D003517 1.2e-06 56.6 88 36.4
BcaNung06173 Brassica carinata HOM05D012012 ORTHO05D013530 1.5e-06 56.2 78 38.5
A07p31820 Brassica napus HOM05D012012 ORTHO05D013530 1.5e-06 56.2 75 38.7
BraA07t30809Z Brassica rapa HOM05D012012 ORTHO05D013530 1.5e-06 56.2 75 38.7
arahy.Tifrunner.gnm1.ann1.PX0JLD Arachis hypogaea HOM05D003095 ORTHO05D003517 2.0e-06 55.8 88 36.4
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 2.6e-06 55.5 65 44.6
BraA07t30811Z Brassica rapa HOM05D012012 ORTHO05D013530 2.6e-06 55.5 64 39.1
Migut.L00519 Erythranthe guttata HOM05D052693 ORTHO05D013530 2.6e-06 55.5 52 42.3
CANSAT56G0597 Cannabis sativa HOM05D003095 ORTHO05D003517 3.4e-06 55.1 63 41.3
MD10G1075100 Malus domestica HOM05D003095 ORTHO05D003517 3.4e-06 55.1 80 37.5
Nn5g29621 Nelumbo nucifera HOM05D003095 ORTHO05D003517 4.4e-06 54.7 64 40.6
Nitab4.5_0003811g0120 Nicotiana tabacum HOM05D003095 ORTHO05D003517 4.4e-06 54.7 56 44.6
Aqoxy1G01518 Aquilegia oxysepala HOM05D003095 ORTHO05D003517 5.7e-06 54.3 57 40.4
arahy.Tifrunner.gnm1.ann1.RU14FQ Arachis hypogaea HOM05D003095 ORTHO05D003517 5.7e-06 54.3 63 42.9
Haze_02394 Corylus avellana HOM05D003095 ORTHO05D003517 5.7e-06 54.3 86 36.0
Hma1.2p1_0098F.1_g048145 Hydrangea macrophylla HOM05D003095 ORTHO05D003517 5.7e-06 54.3 60 40.0
Lalb_Chr25g0280921 Lupinus albus HOM05D003095 ORTHO05D003517 5.7e-06 54.3 65 43.1
Glyma.02G157900 Glycine max HOM05D003095 ORTHO05D003517 7.5e-06 53.9 87 35.6
MD05G1065400 Malus domestica HOM05D003095 ORTHO05D003517 7.5e-06 53.9 63 42.9
Phvul.007G250700 Phaseolus vulgaris HOM05D003095 ORTHO05D003517 7.5e-06 53.9 93 34.4
SEGI_39866 Sequoiadendron giganteum HOM05D003095 ORTHO05D003517 7.5e-06 53.9 56 42.9
Zm00001eb055770 Zea mays HOM05D003095 ORTHO05D003517 7.5e-06 53.9 65 40.0
Zm00001eb295790 Zea mays HOM05D003095 ORTHO05D003517 7.5e-06 53.9 65 40.0
BcaC07g41130 Brassica carinata HOM05D001159 ORTHO05D001712 9.8e-06 53.5 83 33.7
BolC6t38839H Brassica oleracea HOM05D012012 ORTHO05D013530 9.8e-06 53.5 76 36.8
BolC8t51695H Brassica oleracea HOM05D001159 ORTHO05D001712 9.8e-06 53.5 83 33.7
AUR62020660 Chenopodium quinoa HOM05D003095 ORTHO05D003517 9.8e-06 53.5 65 43.1
Ciclev10023076m.g Citrus clementina HOM05D003095 ORTHO05D003517 9.8e-06 53.5 75 40.0
Thhalv10026620m.g Eutrema salsugineum HOM05D003095 ORTHO05D003517 9.8e-06 53.5 81 37.0
Gohir.A13G067200 Gossypium hirsutum HOM05D003095 ORTHO05D003517 9.8e-06 53.5 91 35.2
Peaxi162Scf00016g00073 Petunia axillaris HOM05D003095 ORTHO05D003517 9.8e-06 53.5 65 43.1


User provided reference genes

Program Settings