Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.7e-64 249.6 168 100.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 3.6e-38 162.2 170 73.5
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 8.0e-38 161.0 170 73.5
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.4e-37 160.2 170 74.1
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.8e-37 159.8 165 74.5
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.3e-37 159.5 170 72.4
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.0e-37 159.1 170 72.9
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.1e-36 157.1 168 70.8
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.5e-36 156.8 170 73.5
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.0e-36 156.4 172 72.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 7.5e-36 154.5 170 71.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 7.5e-36 154.5 169 72.2
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 7.5e-36 154.5 167 73.1
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.7e-35 153.3 170 71.8
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.6e-33 146.7 163 69.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.0e-33 146.4 145 77.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.5e-33 145.6 168 71.4
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 3.5e-33 145.6 175 69.1
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 3.5e-33 145.6 168 67.9
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.5e-33 145.2 178 68.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 4.5e-33 145.2 166 71.7
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.7e-32 143.3 173 66.5
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.2e-32 142.9 171 70.2
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 8.5e-32 141.0 170 70.0
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 8.5e-32 141.0 172 69.8
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 8.5e-32 141.0 163 70.6
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 1.1e-31 140.6 169 69.2
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.5e-31 140.2 171 68.4
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.5e-31 139.4 172 68.0
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 2.5e-31 139.4 166 69.3
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 3.2e-31 139.0 172 69.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 68.3
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 4.2e-31 138.7 166 69.3
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 5.5e-31 138.3 164 68.3
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 7.2e-31 137.9 149 75.2
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 9.4e-31 137.5 166 69.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 9.4e-31 137.5 142 75.4
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 9.4e-31 137.5 175 68.0
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.2e-30 137.1 163 69.3
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.2e-30 137.1 156 71.8
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 2.1e-30 136.3 134 81.3
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.1e-30 136.3 132 78.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 2.7e-30 136.0 159 70.4
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.7e-30 135.2 168 69.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 6.1e-30 134.8 167 65.3
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 6.1e-30 134.8 167 68.3
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.0e-29 134.0 165 69.7
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.0e-29 134.0 168 66.7
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.8e-29 133.3 132 78.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.8e-29 133.3 136 80.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 3.0e-29 132.5 168 69.0
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.0e-29 132.1 170 67.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 5.2e-29 131.7 131 79.4
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 8.8e-29 131.0 165 69.1
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 8.8e-29 131.0 131 79.4
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 8.8e-29 131.0 131 79.4
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 1.2e-28 130.6 131 78.6
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.2e-28 130.6 170 67.1
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.2e-28 130.6 170 67.1
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.0e-28 129.8 131 77.9
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 2.6e-28 129.4 144 73.6
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 2.6e-28 129.4 165 66.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.4e-28 129.0 130 79.2
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.4e-28 129.0 105 67.6
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 4.4e-28 128.6 176 67.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.3e-27 127.1 134 79.1
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.7e-27 126.7 167 67.7
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 3.7e-27 125.6 127 64.6
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 3.7e-27 125.6 115 84.3
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 3.7e-27 125.6 115 84.3
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 3.7e-27 125.6 138 73.2
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 6.3e-27 124.8 108 63.9
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 8.3e-27 124.4 165 66.7
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.4e-26 123.6 130 76.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.1e-26 122.5 129 78.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 7.0e-26 121.3 127 77.2
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 7.7e-25 117.9 134 76.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.3e-24 117.1 142 68.3
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.9e-24 115.9 133 68.4
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.9e-23 113.2 71 76.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.5e-23 112.8 128 72.7
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.5e-23 111.7 127 74.0
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.7e-22 109.4 138 44.9
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 8.0e-22 107.8 125 76.0
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.0e-21 107.5 140 56.4
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 4.0e-21 105.5 132 68.9
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.2e-20 104.0 156 62.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.5e-20 103.6 78 69.2
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.5e-20 103.6 111 73.9
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.6e-20 102.8 115 47.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.4e-20 102.4 145 64.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 7.5e-20 101.3 125 69.6
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.3e-16 90.5 128 44.5
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 4.3e-15 85.5 130 65.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.2e-14 84.0 124 66.1
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.2e-14 84.0 123 65.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.8e-13 80.1 109 67.9
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.6e-12 76.3 89 68.5
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 8.3e-11 71.2 82 46.3
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 9.2e-10 67.8 105 41.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.2e-09 67.4 131 58.8
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.2e-09 67.4 100 36.0
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 2.1e-06 56.6 34 82.4


User provided reference genes

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