Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.3e-157 560.5 467 100.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.1e-113 414.5 476 75.4
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.1e-110 404.4 417 72.4
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.6e-107 394.0 396 82.1
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 5.0e-106 389.0 409 78.5
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.1e-105 387.9 472 70.8
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 4.2e-105 386.0 408 84.3
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.0e-103 381.3 420 74.5
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 8.8e-103 378.3 407 79.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 3.4e-102 376.3 408 75.0
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.3e-101 374.4 412 78.9
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.3e-101 374.4 414 76.1
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 2.2e-101 373.6 401 76.3
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.8e-100 370.5 411 75.9
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.4e-100 370.2 470 72.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.1e-100 369.8 408 69.4
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 7.0e-100 368.6 431 75.4
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 7.0e-100 368.6 411 70.1
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 2.2e-98 363.6 408 75.0
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.9e-98 363.2 411 70.8
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.8e-98 362.8 412 73.8
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 6.5e-98 362.1 404 77.0
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 6.5e-98 362.1 410 69.8
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 6.5e-98 362.1 401 74.8
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.5e-97 360.9 411 71.3
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.5e-97 360.1 419 61.3
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 4.2e-97 359.4 414 76.8
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.6e-96 357.5 368 78.5
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 2.1e-96 357.1 409 70.9
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.0e-95 354.8 405 61.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.4e-95 354.4 407 67.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.8e-95 354.0 417 74.8
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 4.0e-95 352.8 417 75.3
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 6.8e-95 352.1 408 70.1
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 8.8e-95 351.7 417 69.1
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.5e-94 350.9 408 71.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.5e-94 350.9 369 80.2
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.0e-94 350.5 390 71.5
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.0e-94 350.5 412 73.3
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 7.5e-94 348.6 407 69.3
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.7e-93 347.4 395 73.7
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.3e-93 345.5 414 75.8
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.1e-92 344.7 407 71.3
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 3.5e-91 339.7 416 70.4
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.3e-90 337.8 424 67.2
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.3e-90 337.8 406 71.7
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 2.9e-90 336.7 415 71.8
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 3.8e-90 336.3 412 72.6
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 5.6e-89 332.4 423 75.2
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 7.2e-89 332.0 409 71.6
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 9.5e-89 331.6 412 72.6
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 6.1e-88 328.9 399 72.2
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 8.0e-88 328.6 419 70.9
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.0e-88 328.6 433 56.8
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.4e-87 327.8 406 71.7
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 6.8e-87 325.5 413 71.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 6.8e-87 325.5 422 74.6
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.2e-86 324.7 245 75.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.2e-86 324.7 245 75.9
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 5.7e-86 322.4 243 78.2
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 9.8e-86 321.6 407 68.8
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.7e-85 320.9 428 58.2
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.9e-85 320.1 207 87.9
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.7e-85 319.7 458 58.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.8e-84 317.4 206 83.0
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 3.2e-84 316.6 428 65.2
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.2e-83 314.7 398 64.6
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 3.5e-83 313.2 412 70.4
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 3.5e-83 313.2 392 66.8
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.9e-82 310.1 413 72.4
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 3.3e-81 306.6 421 64.1
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.2e-80 304.7 428 63.8
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.2e-80 304.7 492 58.7
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 8.0e-80 302.0 431 67.1
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.8e-79 300.8 429 67.4
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.3e-79 300.4 243 74.1
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 4.0e-79 299.7 437 64.3
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 4.0e-79 299.7 416 50.7
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 6.8e-79 298.9 259 65.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.2e-78 298.1 361 69.8
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.6e-78 297.0 410 63.9
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 7.5e-78 295.4 257 68.9
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.7e-77 294.3 243 73.3
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.2e-69 267.3 160 83.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 6.4e-69 265.8 160 82.5
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.1e-68 265.0 243 65.0
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 2.4e-68 263.8 210 72.9
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 6.6e-66 255.8 160 76.9
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.3e-65 252.3 147 85.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 4.4e-62 243.0 160 75.0
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.7e-61 241.1 159 74.8
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.7e-61 240.0 160 73.1
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 3.7e-61 240.0 160 73.1
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 3.7e-61 240.0 160 73.1
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 3.7e-61 240.0 160 73.1
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.9e-60 237.7 160 72.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.2e-59 235.0 208 66.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 3.5e-59 233.4 162 71.6
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 7.8e-59 232.3 207 67.6
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.5e-57 228.0 203 60.1
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.1e-55 220.3 160 68.8
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 4.9e-53 213.0 160 66.9
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-47 194.9 369 62.3
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 9.0e-47 192.2 159 61.0
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 9.0e-47 192.2 159 61.0
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.9e-45 187.2 161 60.2
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.9e-45 187.2 161 60.2
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 2.4e-39 167.5 152 59.9
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 3.1e-31 140.6 162 50.0
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 6.0e-27 126.3 162 46.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.5e-25 120.9 161 44.1
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 2.5e-20 104.4 158 41.1
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-16 90.1 57 77.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.1e-15 89.0 139 39.6
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 7.2e-12 76.3 103 51.5
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.9e-11 72.8 264 58.0
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.0e-10 72.4 111 38.7
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.0e-10 72.4 95 46.3
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 6.9e-07 59.7 86 59.3
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.5e-06 58.5 109 33.9
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.5e-06 58.5 82 42.7


User provided reference genes

Program Settings