Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 5.2e-260 900.6 477 100.0
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.3e-105 386.3 490 48.8
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 4.3e-105 386.0 490 49.0
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 5.6e-105 385.6 489 49.3
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.6e-102 376.7 487 47.4
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 7.6e-102 375.2 499 47.3
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.2e-101 373.6 485 46.4
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.1e-99 367.1 448 47.3
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 6.3e-96 355.5 452 48.9
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 8.2e-96 355.1 490 46.7
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.4e-95 354.4 438 49.1
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 3.8e-93 346.3 490 44.9
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.6e-91 340.9 472 47.2
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 2.1e-91 340.5 532 42.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.7e-91 340.1 490 45.3
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.8e-90 337.4 571 40.5
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.1e-87 328.2 504 44.2
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 6.9e-87 325.5 413 49.2
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.0e-86 323.9 499 42.9
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 2.6e-86 323.6 507 43.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 5.9e-86 322.4 496 43.3
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.3e-85 321.2 490 42.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.9e-85 320.1 496 43.1
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 2.5e-84 317.0 502 41.8
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 9.4e-84 315.1 496 42.9
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 2.7e-83 313.5 494 42.3
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 6.1e-83 312.4 493 43.4
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 1.5e-81 307.8 504 41.7
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 4.4e-81 306.2 415 46.7
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 4.4e-81 306.2 499 41.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 6.3e-80 302.4 490 39.4
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 2.4e-79 300.4 498 42.6
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.6e-78 297.0 509 39.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 3.4e-78 296.6 495 38.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 4.5e-78 296.2 501 39.3
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 4.5e-78 296.2 500 41.8
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 7.7e-78 295.4 499 37.9
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 1.0e-77 295.0 487 42.7
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.0e-77 295.0 505 41.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.3e-77 294.7 491 41.5
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.3e-77 294.7 483 42.9
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.3e-77 294.7 497 42.1
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 8.5e-77 292.0 486 42.8
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.4e-76 291.2 484 39.3
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 9.4e-76 288.5 505 40.8
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.0e-74 285.0 485 38.8
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.1e-73 281.6 491 41.5
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.2e-72 277.3 493 38.5
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.6e-70 271.2 505 38.6
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.3e-69 268.1 510 39.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.3e-69 268.1 508 36.4
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.7e-69 267.7 445 39.6
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.2e-69 267.3 501 36.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.2e-69 267.3 499 40.1
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 8.5e-69 265.4 466 39.5
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.5e-68 263.8 500 40.2
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 4.0e-66 256.5 499 38.5
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.3e-65 253.4 518 36.5
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 2.2e-64 250.8 509 37.3
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.8e-64 250.4 431 39.9
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 3.7e-64 250.0 504 37.3
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 8.2e-64 248.8 361 45.2
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.1e-63 248.4 410 40.2
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.0e-62 244.2 485 36.5
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.3e-61 241.5 422 39.1
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.2e-61 240.7 488 35.9
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 6.5e-61 239.2 525 36.2
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 9.4e-60 235.3 497 35.2
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 9.4e-60 235.3 602 31.9
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 4.7e-59 233.0 509 34.2
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 2.0e-57 227.6 348 42.8
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 8.3e-56 222.2 356 41.6
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 4.5e-54 216.5 476 35.5
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.5e-52 210.7 385 37.7
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.8e-50 204.5 328 43.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.0e-50 203.4 333 42.9
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.9e-48 196.4 325 41.8
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 7.3e-44 182.6 307 41.4
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.2e-43 181.8 442 33.9
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 3.0e-42 177.2 198 48.5
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.5e-41 174.9 284 42.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.8e-38 162.5 291 41.9
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.7e-37 161.4 572 28.3
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.5e-36 158.3 435 30.3
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 4.7e-35 153.3 306 35.9
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 2.3e-34 151.0 484 30.2
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.0e-33 147.9 170 49.4
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 7.8e-30 136.0 497 28.6
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.1e-26 125.6 190 42.1
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 5.8e-25 119.8 363 28.7
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.9e-23 114.8 219 38.4
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 5.4e-23 113.2 172 39.0
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 8.6e-21 105.9 141 45.4
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.3e-20 103.6 158 41.8
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 2.3e-13 81.3 121 43.0
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 4.7e-11 73.6 105 43.8
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 6.2e-11 73.2 269 25.7
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 6.9e-10 69.7 164 31.7
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 1.3e-08 65.5 284 26.1
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 1.3e-08 65.5 228 28.1
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 5.4e-07 60.1 92 34.8
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 9.3e-07 59.3 80 35.0
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.2e-06 58.9 159 30.8
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.5e-06 57.4 70 47.1


User provided reference genes

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