Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 8.8e-96 353.6 177 100.0
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.4e-77 293.1 173 81.5
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 2.9e-75 285.4 172 77.9
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 5.0e-75 284.6 172 79.1
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 8.6e-75 283.9 171 81.3
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.5e-74 283.1 172 80.8
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 1.5e-74 283.1 170 82.9
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 7.3e-74 280.8 172 80.2
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 7.3e-74 280.8 172 80.2
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 9.5e-74 280.4 172 76.2
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 9.5e-74 280.4 172 76.2
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 9.5e-74 280.4 172 76.2
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.6e-73 279.6 172 79.1
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.6e-73 279.6 172 79.1
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 1.6e-73 279.6 175 75.4
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.6e-73 279.6 175 78.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.6e-73 279.6 172 79.7
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 2.8e-73 278.9 172 79.7
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 2.8e-73 278.9 172 79.1
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 6.1e-73 277.7 170 80.6
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.0e-72 276.9 172 77.9
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 1.4e-72 276.6 151 88.7
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.4e-72 276.6 172 76.7
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 1.8e-72 276.2 171 79.5
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 3.1e-72 275.4 172 77.9
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 5.2e-72 274.6 172 76.2
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 6.8e-72 274.2 169 79.9
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 3.4e-71 271.9 176 77.8
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.4e-71 271.9 174 74.1
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.4e-71 271.9 174 75.9
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 4.4e-71 271.6 172 79.1
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.2e-70 269.2 172 76.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 6.4e-70 267.7 175 73.1
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.1e-69 266.9 162 79.6
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 1.1e-69 266.9 172 74.4
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.4e-69 266.5 172 74.4
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 2.4e-69 265.8 174 74.1
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 2.4e-69 265.8 174 74.7
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 3.2e-69 265.4 174 73.6
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 3.2e-69 265.4 174 73.6
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 4.1e-69 265.0 172 73.3
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 4.1e-69 265.0 172 73.8
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 5.4e-69 264.6 174 73.6
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 5.4e-69 264.6 172 72.7
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 5.4e-69 264.6 172 73.8
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 5.4e-69 264.6 174 74.7
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 7.0e-69 264.2 172 73.3
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 7.0e-69 264.2 171 73.7
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 9.2e-69 263.8 172 75.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 9.2e-69 263.8 174 74.1
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 9.2e-69 263.8 174 74.1
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 9.2e-69 263.8 170 75.9
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 1.2e-68 263.5 172 72.7
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.6e-68 263.1 174 73.0
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 4.6e-68 261.5 175 72.6
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 6.0e-68 261.2 172 72.1
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.8e-68 260.8 162 78.4
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.0e-67 260.4 172 73.3
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 6.6e-67 257.7 151 81.5
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.6e-67 257.3 174 70.7
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.5e-66 255.8 171 73.7
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 2.5e-66 255.8 171 71.9
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 3.3e-66 255.4 172 70.9
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 4.3e-66 255.0 172 74.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.2e-65 253.4 175 70.3
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 2.1e-65 252.7 152 78.9
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.4e-64 250.0 172 69.8
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 8.3e-62 240.7 133 86.5
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.4e-61 240.0 180 62.2
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.6e-60 236.5 149 77.9
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.3e-59 233.4 146 77.4
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.7e-59 233.0 152 75.7
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 6.6e-59 231.1 145 78.6
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.5e-58 229.9 146 75.3
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-58 229.6 137 76.6
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 2.5e-58 229.2 162 72.2
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.6e-57 226.5 148 75.0
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 1.6e-57 226.5 160 66.2
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 1.8e-56 223.0 147 68.0
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.1e-56 222.2 171 62.6
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 5.2e-56 221.5 145 74.5
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 8.3e-54 214.2 145 75.2
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 2.1e-52 209.5 123 80.5
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 3.5e-52 208.8 122 79.5
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.0e-51 207.2 135 76.3
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.3e-51 206.8 153 65.4
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 5.1e-51 204.9 135 74.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 1.5e-50 203.4 133 75.9
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.6e-47 192.6 108 85.2
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.4e-46 187.6 117 74.4
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 5.4e-45 184.9 109 76.1
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 9.3e-45 184.1 146 58.2
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-42 176.4 131 67.2
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 4.3e-42 175.3 116 70.7
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 4.0e-40 168.7 171 57.9
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 2.0e-39 166.4 116 67.2
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 2.6e-39 166.0 159 56.6
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.1e-37 160.6 88 85.2
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.1e-37 160.6 95 82.1
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 9.3e-37 157.5 144 59.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 4.6e-36 155.2 94 74.5
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 5.1e-35 151.8 126 58.7
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 2.1e-33 146.4 126 49.2
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.4e-32 143.7 100 67.0
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-29 134.0 138 53.6
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 9.3e-29 131.0 115 59.1
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 3.9e-27 125.6 104 61.5
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.1e-26 124.0 75 73.3
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 7.4e-26 121.3 125 43.2
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 4.9e-22 108.6 123 42.3
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 4.9e-22 108.6 63 79.4
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 2.1e-20 103.2 69 71.0
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 7.9e-20 101.3 159 40.3
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.1e-18 97.4 154 44.2
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 9.6e-18 94.4 75 62.7
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.8e-11 73.6 53 60.4


User provided reference genes

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